Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3797 ATGGGGTTTGGAAATAAGAATGCAATTAAAGCTGGAAGTTTGGAAGTTGATAAGTCAAAGGTTGATGTTGCAAAGAAAAAGAGAAGAAGATGTTGTTTTAGATTCAGTTTTATTGGATGCTGTAAACCTTCAAGATCAAAATTTGATAGCTCAATTTGTTGCAATGGCACTACTAGTACACAAATTGGTGATAATACCAAGTCAGTAATAATTCAATCAGAGGAAAACAAATCTGCATCTGAATCAAACACGAAGGAATCACTTGGTCTTGTAGATTCCTCTACAACAACTAGTAATGGAGAAAGTATCTCTTCAACTTCAAAATTCAGTGAGGAGTTGAAGGTTGCTTCTTGTTTAAGAAAATTCACATTCAATGGACTTAAGGTAGCAACTAGGAATTTCAGACCAGAAAGTCTTCTAGGTGAAGGAGGATTTGGTTGTGTTTTCAAAGGTTGGATTGAAGAGAATGGAACTGCGCCTGTGAAACCGGGTACCGGACTTACGGTTGCTGTTAAGATCCTCAACCACAATGGACATCAAGGTCACAAAGAATGGCTTGCTGAATTAAATTATCTTGGAGATCTTGTCCATCCTAATCTTGTTAAATTGATAGGTTTCTGTATTGAAGATGATCAAAGATTATTGGTTTACGAATTTATGCCGCGAGGAAGTTTGGAGAATCATCTCTTCAGAAGGCCCTTGCCTCTACCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTCCATGAAGGAGCTCAGAGGCCCGTGATATATCGTGATTTTAAGACATCTAATATTCTATTAGATGCGGAATATAACGCAAAGCTTTCTGATTTTGGACTTGCGAAAGATGCTCCTGAGGGAGAAAATACACATGTATCAACAAGAGTTATGGGGACGTATGGTTATGCTGCTCCAGAATATGTGATGACTGGACATTTGTCATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTACTTGAAATGCTTACCGGCCGACGATCTATTGACAAGAAAAGGCCAAATGGAGAGCACAATCTGGTGGAATGGGCAAGACCTGTACTTGGAGACAGGAGGATGTTCTATCGAATCATCGATCCCCGCCTCGAAGGTCACTTTTCGGTTAAAGGAGCACAGAAAGCAGCGCAACTAGCTGCTCAATGCCTTAGCCGTGATCCAAAATCTAGACCTTTGATGAGTGAAATTGTTCATGCTTTAAAGCCTTTGCCAAATCTTAAGGATATGGCCATATCATCTCATCAATTCAAGATCGCACGCGTTGATCGTACCATGTCCATGCCTAATTCTAAAAACGGTATTAGAACTGATTTAGCATCTTTACCAAAGGGTCAGCCGAAAAGGACTTTGTCGAGTTCAAATTATGGACATGGTTCTCCTTATCCTCGTCATAGCAAGTCTCCAAAACCTATTGCGTAA 1461 0.399 MGFGNKNAIKAGSLEVDKSKVDVAKKKRRRCCFRFSFIGCCKPSRSKFDSSICCNGTTSTQIGDNTKSVIIQSEENKSASESNTKESLGLVDSSTTTSNGESISSTSKFSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKILNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEGAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDAPEGENTHVSTRVMGTYGYAAPEYVMTGHLSSKSDVYSFGVVLLEMLTGRRSIDKKRPNGEHNLVEWARPVLGDRRMFYRIIDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEIVHALKPLPNLKDMAISSHQFKIARVDRTMSMPNSKNGIRTDLASLPKGQPKRTLSSSNYGHGSPYPRHSKSPKPIA* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3797 486 ProSiteProfiles Protein kinase domain profile. 134 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3797 486 Pfam Protein tyrosine and serine/threonine kinase 138 414 IPR001245 GO:0004672|GO:0006468
Mal6g3797 486 PANTHER OS01G0588500 PROTEIN-RELATED 64 478 - -
Mal6g3797 486 Gene3D Transferase(Phosphotransferase) domain 1 220 438 - -
Mal6g3797 486 SUPERFAMILY Protein kinase-like (PK-like) 109 414 IPR011009 -
Mal6g3797 486 CDD STKc_IRAK 140 417 - -
Mal6g3797 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mal6g3797 486 MobiDBLite consensus disorder prediction 74 104 - -
Mal6g3797 486 Gene3D Phosphorylase Kinase; domain 1 118 219 - -
Mal6g3797 486 MobiDBLite consensus disorder prediction 437 486 - -
Mal6g3797 486 ProSitePatterns Protein kinases ATP-binding region signature. 140 172 IPR017441 GO:0005524
Mal6g3797 486 PANTHER RECEPTOR-LIKE KINASE PLANT 64 478 - -
Mal6g3797 486 MobiDBLite consensus disorder prediction 459 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3797 Mal-Chr6 110690234 110693340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3797 86 426 Glycoside Hydrolase AT3G07070 51.585 2.07e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal6g3797 PK_Tyr_Ser-Thr 9.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3797 - - gmx:100499647 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3797 6 110690234 110693340 Mal3g0109 3 4110091 4113885 PCT