Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3787 ATGGAAATGATGATAAAGAATGAAGAGAGCAAGAGAATAAGCTGCATGTCCATGGTAGATGGTGATTTTCAAGTAATTTCCAAGAGACGGCGAAGAGAGCCTGCCGCGGTGGTACTTACTTCTGAGGATAATCCAAGTCAGAAGCAACAAGTTTGTCAAAATTCTACTACCAGCACCACAAAGAGAAGTTCAAGATTTCGAGGTGTTAGCAGACATCGATGGACGGGTCGATATGAAGCTCACTTATGGGACAAGCTATCTTGGAACATGACCCAAAAGAAGAAAGGGAAGCAAGGGGCTTACGACGACGAAGAATCAGCAGCCAGAGCATATGATTTAGCTGCACTAAAGTATTGGGGAACATTGACTGTCACCAATTTTCCCGTCTCAGATTATGAGGAACAGGTAGAGATAATGCAAACTATGACAAAAGAGGAGTACTTAGCTACCTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGCGCATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAACGGTAGATGGGAAGCACGGATTGGAAGGGTTTTTGGAAACAAGTATCTCTACCTTGGCACCTACAGCACCCAAGAGGAAGCTGCTCGTGCTTATGACATAGCAGCCATTGAGTACAGAGGGAGCCATGCTATAACAAACTTCGACTTGAGTACTTATATGAGATGGTTAAAATCTTCAGCAGGAAATATCTCAGAAACCAAAGTTGAAAAACTGGAAGTACCAGAGTCTCAGGCAGTGGCATCTCAATCTAACTATTCTCTTTCAGAGGGGTCCAATTCCTTGGCCATCAATAGCACTACTTATAATAATTCAGATTACCTGAATTCCCCTCAAAAGTATGAACCTTTTGAGAATAAAACATACGAAATGTCCAGCACTAAGTCTTGTTCTTCTCCCACTGCACTTGGGCTACTTTTCCGCTCAACAATATTTAGAGAGTTAGTTCAAAAGAATTCGAACATATCTGAAGAGGAAACTAATGGGGAAGACGCAAAAGATAAACAGCCACTGACAGCAGCAGCAAGTGATGATGAGTTGGATGGGATCTTTTGTGATAGAACTGGGGATGCCCCCTTTTTGAAACCCCAATGGACAAATTAG 1122 0.4278 MEMMIKNEESKRISCMSMVDGDFQVISKRRRREPAAVVLTSEDNPSQKQQVCQNSTTSTTKRSSRFRGVSRHRWTGRYEAHLWDKLSWNMTQKKKGKQGAYDDEESAARAYDLAALKYWGTLTVTNFPVSDYEEQVEIMQTMTKEEYLATLRRKSSGFSRGASKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGSHAITNFDLSTYMRWLKSSAGNISETKVEKLEVPESQAVASQSNYSLSEGSNSLAINSTTYNNSDYLNSPQKYEPFENKTYEMSSTKSCSSPTALGLLFRSTIFRELVQKNSNISEEETNGEDAKDKQPLTAAASDDELDGIFCDRTGDAPFLKPQWTN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3787 373 CDD AP2 163 224 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 Gene3D AP2/ERF domain 163 224 IPR036955 GO:0003700|GO:0006355
Mal6g3787 373 Gene3D AP2/ERF domain 64 130 IPR036955 GO:0003700|GO:0006355
Mal6g3787 373 Pfam AP2 domain 163 214 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 Pfam AP2 domain 64 120 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 MobiDBLite consensus disorder prediction 40 64 - -
Mal6g3787 373 SUPERFAMILY DNA-binding domain 64 130 IPR016177 GO:0003677
Mal6g3787 373 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 9 358 - -
Mal6g3787 373 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 358 - -
Mal6g3787 373 SUPERFAMILY DNA-binding domain 163 224 IPR016177 GO:0003677
Mal6g3787 373 SMART rav1_2 164 228 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 SMART rav1_2 65 134 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 ProSiteProfiles AP2/ERF domain profile. 164 222 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 CDD AP2 66 130 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 MobiDBLite consensus disorder prediction 38 66 - -
Mal6g3787 373 MobiDBLite consensus disorder prediction 327 352 - -
Mal6g3787 373 MobiDBLite consensus disorder prediction 330 352 - -
Mal6g3787 373 PRINTS Ethylene responsive element binding protein signature 204 224 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Mal6g3787 373 ProSiteProfiles AP2/ERF domain profile. 65 128 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3787 Mal-Chr6 110398262 110400288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3787 26 282 AP2-EREBP Transcription Factor Family AT5G57390 52.874 1.93e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal6g3787 AP2 5.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3787 - - ahf:112716370 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3787 6 110398262 110400288 Mal6g3787 6 110398262 110400288 ECH