Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3781 ATGATCTTTGATAATGATGAGGTTGTTGTTGGTGCTCAAAATTCTTCATCCAACCGTAAAGCAGGAGTATCAGGATCATCAACTCCCAATGATATACATTACTCTTCCAATCTAAACCAATTTACCTATCAGGAACTAAAATTGGCTACAAGAAACTTCTTACCAGAATGTTTTCTTGGTGAGGGAGGTTTCGGTTCAGTGTACAAAGGCTGGATTGGTCGTAATTCAAGACCAGTTGCTGTAAAAACTCTCAACAAAGAAGGCAATCAAGGTCACAAAGAATGGCTGGCTGAAATTAACCATCTTGGTGCTCTTCAGCATCCAAATCTGGTTAGACTTATTGGTTATTGTAATGAAGATGAAAATAGGATGCTTGTTTATGAGTTTATGCCAAGAGGAAGCTTGGAAAATCATCTATTTAAGAGAAGATCTGTACCCCTTACATGGGCTATGAGAATGAAAATTATGCTTGGTGCTGCAAAAGGTCTTGCATTTTTGCATGAGGAAGCTGAAAAGCCAATCATATATAGAGATTTCAAAACTTCCAATATCCTATTGGATTCGGATTATAATGCCAAACTTTCTGATTTTGGGCTAGCCAAAGATGGTCCAATAGGAGATAAAACTCATGTATCGACTCAAGTGATTGGAACACAAGGCTATGCAGATCCCGAATATGTCATGACGGGACACCTTAGTTCCAAAAGTGATGTTTATAGCTTTGGTGTGGTTCTCCTAGAGATGCTAACTGGAAGAAAAGCAATTGATAGGAGAAGACCAGAAGTGGAACAAAATTTGATTAAATGGGCAAAACCATTCTTAAGAACACCTGGAGGAGGGTTCTATCAATTAATGGATCCAAAACTCCAAGACCAATACTCCAAAAAAGGTGCCTATAAAGCAATGAAAATAGTGGCACATTGCATTTATCATGACAAAAAAGAAAGGCCATTAATGAGTGAAGTTGTTAAGGAGCTCAAAAATATCCTTGCTTACAACAATGACATCCCTTGTTCACCAATGCCATCACCATTATCCTTTAAGGTTTTGCATGATGGCCCTTCTTCTTCTAGTTCCTCTAGACATGGTGGTCGCGGCAGCGGTGCTAATAAATATGGTCCTAAAGTTGGTTCATCATCTTCAGCTTCAGTTCCATCTACTCCAACTCGATTTCAGGGTTCGCCATTGAACTTTGTCCCTCCTTTTCTTTCACCAAATCCTCCTCGTGGTGGAAATATTCAATGA 1245 0.3904 MIFDNDEVVVGAQNSSSNRKAGVSGSSTPNDIHYSSNLNQFTYQELKLATRNFLPECFLGEGGFGSVYKGWIGRNSRPVAVKTLNKEGNQGHKEWLAEINHLGALQHPNLVRLIGYCNEDENRMLVYEFMPRGSLENHLFKRRSVPLTWAMRMKIMLGAAKGLAFLHEEAEKPIIYRDFKTSNILLDSDYNAKLSDFGLAKDGPIGDKTHVSTQVIGTQGYADPEYVMTGHLSSKSDVYSFGVVLLEMLTGRKAIDRRRPEVEQNLIKWAKPFLRTPGGGFYQLMDPKLQDQYSKKGAYKAMKIVAHCIYHDKKERPLMSEVVKELKNILAYNNDIPCSPMPSPLSFKVLHDGPSSSSSSRHGGRGSGANKYGPKVGSSSSASVPSTPTRFQGSPLNFVPPFLSPNPPRGGNIQ* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3781 414 Pfam Protein kinase domain 59 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3781 414 PANTHER OS01G0588500 PROTEIN-RELATED 13 375 - -
Mal6g3781 414 CDD STKc_IRAK 59 329 - -
Mal6g3781 414 Gene3D Phosphorylase Kinase; domain 1 37 129 - -
Mal6g3781 414 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Mal6g3781 414 MobiDBLite consensus disorder prediction 373 394 - -
Mal6g3781 414 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 375 - -
Mal6g3781 414 ProSiteProfiles Protein kinase domain profile. 53 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3781 414 SUPERFAMILY Protein kinase-like (PK-like) 38 354 IPR011009 -
Mal6g3781 414 MobiDBLite consensus disorder prediction 347 414 - -
Mal6g3781 414 Gene3D Transferase(Phosphotransferase) domain 1 130 337 - -
Mal6g3781 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Mal6g3781 414 MobiDBLite consensus disorder prediction 350 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3781 Mal-Chr6 110269418 110273970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3781 41 326 Glycoside Hydrolase AT3G07070 53.125 7.25e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal6g3781 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3781 - - mtr:MTR_3g462840 679.478