Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3768 ATGGATAGACTCATAAAGTTAGATCCATCAAACATAGTACTAATAAGAGTTGAAGAAGGCGAAAAATGTCAAGGAAAAATAACCTTAAACAATGTCATGTATACTATGCCAGTTGCATTTAGGATTCAACCACTTATCAAAACAAGATACACAATTAAACCTCAATCAGGAATCATTTCACCATTAGCATCACTAATCATAGAGATTACATATCATCCTCCACAACAAGGTTCAAATAATCTCCCTCACTCTTTTCCTTTTTCAGATGATTCATTTCTTCTCCATAGTGTTCTTGCTCCAGGTGCAGCAATCAAAGAACCTTCATCTATGTTTGATTCTGTTCCAAGTGATTGGTTCACTACCAAGAAAAAACAAGTTTTCATTGATAGTGCAATCAAAGTCATGTTTGTTGGTTCACAAATTTTAACTCAACTTGTTGAAGATGGTAACTCAATGGATGATATAAGAGAAGTGCTTGAAAAAAGTGATCCTTTATGGGAATCAGTTAACTCTAAAGACTCAAAAGGTCAAACTTTGCTTCATTTGGCGATTTCGAAAACAAGACCTGATCTTGTTCAATTGATCCTTGAATTCAAGCCTGATATTGAAGCTACTAATAGTGTTGGATCAACCCCTCTTGAGGCTGCATCTTCCTCCGGTGAGTCGTTGATTGTCGAGCTTCTTTTAGCTCATAAGGCTAACACAGAAGGATCAGAATCTTCGGTTTTTCGACCGATTCATCACGCTTCAAGAGAAGGACACATGGAGATTCTTAGGCTTCTTTTACTCAAAGGTGCAAAAGTTGATTCATTGACAAAAGATGGTAACACTTCTTTGCATCTAGCTGTTGAAGAAAAAAGAAGAGATTGCGCTAGGCTTTTGTTGGCGAACGGCGCGCGAACTGATGTTCGAAATACAAGAGAAGGTGACACTCCTTTGCACATAGCAGCAGCCAATGGAGATGAGAACATGGTGAAGCTTTTACTTCATAAAGGAGCTACAAAATATGTGAGAAACAAACTAGGGAAAACGGCGTTCGATGTTGCTGCTGAGAACGGACACTCGCGCCTGTTCGATGCACTTCGTTTAGGGGACAGTTTATGTGCGGCTGCGCGGAAAGGCGAGGTTAGGACAATCCAAAAGGTTTTGGAAAGTGGTGGAGTGATCAATGGAAGGGATCAAAATGGATGGACATCACTTCACAGGGCTTCATTCAAAGGAAGAATGGATGCTGTTAGGTTTCTTGTCGAAAAAGGTATTGATTTGGATGCAAGAGATGAAGATGGTTACACTGCTTTGCATTGTGCTGCTGAATCAGGACATGCTGATGTGACTGAGTTTTTGGTTAAGAAAGGTGCTGATGTTGAAGCAAGGACTAATAAAGGTGTGAGTGCTTTGCAAATTGTTGAGTCATTGAACTATGTAGGGATTACAAGGATACTTGTTAATGGTGGTGCTAGTAGGGAAGGTTTGGGTGAAAAACCACCAACTGCACCTTCTAAGATTCCTTTTGGCAGTAAAGTTGAAGGTGGAAGTATGATGACGATGAAGAAGAAGATGAGTAGTAGAACTCGAGCGCTAAGAGGTAGTTTCGATCGTTCGATGCCTTTGGCTGTTCTCTAG 1623 0.4011 MDRLIKLDPSNIVLIRVEEGEKCQGKITLNNVMYTMPVAFRIQPLIKTRYTIKPQSGIISPLASLIIEITYHPPQQGSNNLPHSFPFSDDSFLLHSVLAPGAAIKEPSSMFDSVPSDWFTTKKKQVFIDSAIKVMFVGSQILTQLVEDGNSMDDIREVLEKSDPLWESVNSKDSKGQTLLHLAISKTRPDLVQLILEFKPDIEATNSVGSTPLEAASSSGESLIVELLLAHKANTEGSESSVFRPIHHASREGHMEILRLLLLKGAKVDSLTKDGNTSLHLAVEEKRRDCARLLLANGARTDVRNTREGDTPLHIAAANGDENMVKLLLHKGATKYVRNKLGKTAFDVAAENGHSRLFDALRLGDSLCAAARKGEVRTIQKVLESGGVINGRDQNGWTSLHRASFKGRMDAVRFLVEKGIDLDARDEDGYTALHCAAESGHADVTEFLVKKGADVEARTNKGVSALQIVESLNYVGITRILVNGGASREGLGEKPPTAPSKIPFGSKVEGGSMMTMKKKMSSRTRALRGSFDRSMPLAVL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3768 540 ProSiteProfiles Ankyrin repeat region circular profile. 175 206 - -
Mal6g3768 540 Gene3D - 313 360 IPR036770 -
Mal6g3768 540 Gene3D - 241 312 IPR036770 -
Mal6g3768 540 ProSiteProfiles Ankyrin repeat profile. 428 460 IPR002110 GO:0005515
Mal6g3768 540 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 540 - -
Mal6g3768 540 ProSiteProfiles Ankyrin repeat region circular profile. 241 269 - -
Mal6g3768 540 Gene3D - 361 495 IPR036770 -
Mal6g3768 540 ProSiteProfiles Ankyrin repeat profile. 175 207 IPR002110 GO:0005515
Mal6g3768 540 ProSiteProfiles Ankyrin repeat profile. 308 340 IPR002110 GO:0005515
Mal6g3768 540 ProSiteProfiles Ankyrin repeat profile. 274 306 IPR002110 GO:0005515
Mal6g3768 540 ProSiteProfiles Ankyrin repeat profile. 208 240 IPR002110 GO:0005515
Mal6g3768 540 ProSiteProfiles Ankyrin repeat profile. 241 273 IPR002110 GO:0005515
Mal6g3768 540 SUPERFAMILY PapD-like 2 150 IPR008962 -
Mal6g3768 540 Gene3D - 130 240 IPR036770 -
Mal6g3768 540 PRINTS Ankyrin repeat signature 309 324 IPR002110 GO:0005515
Mal6g3768 540 PRINTS Ankyrin repeat signature 444 458 IPR002110 GO:0005515
Mal6g3768 540 ProSiteProfiles Ankyrin repeat region circular profile. 274 305 - -
Mal6g3768 540 ProSiteProfiles Ankyrin repeat region circular profile. 395 427 - -
Mal6g3768 540 SUPERFAMILY Ankyrin repeat 168 497 IPR036770 -
Mal6g3768 540 Pfam Ankyrin repeats (3 copies) 158 234 IPR002110 GO:0005515
Mal6g3768 540 Pfam Ankyrin repeats (3 copies) 368 458 IPR002110 GO:0005515
Mal6g3768 540 Pfam Ankyrin repeats (3 copies) 245 304 IPR002110 GO:0005515
Mal6g3768 540 ProSiteProfiles Ankyrin repeat profile. 395 427 IPR002110 GO:0005515
Mal6g3768 540 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 540 - -
Mal6g3768 540 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 137 IPR000535 -
Mal6g3768 540 Pfam MSP (Major sperm protein) domain 5 110 IPR000535 -
Mal6g3768 540 Gene3D Immunoglobulins 1 128 IPR013783 -
Mal6g3768 540 ProSiteProfiles Ankyrin repeat region circular profile. 308 333 - -
Mal6g3768 540 ProSiteProfiles Ankyrin repeat region circular profile. 428 460 - -
Mal6g3768 540 SMART ANK_2a 308 337 IPR002110 GO:0005515
Mal6g3768 540 SMART ANK_2a 395 424 IPR002110 GO:0005515
Mal6g3768 540 SMART ANK_2a 274 303 IPR002110 GO:0005515
Mal6g3768 540 SMART ANK_2a 175 204 IPR002110 GO:0005515
Mal6g3768 540 SMART ANK_2a 208 237 IPR002110 GO:0005515
Mal6g3768 540 SMART ANK_2a 341 370 IPR002110 GO:0005515
Mal6g3768 540 SMART ANK_2a 428 457 IPR002110 GO:0005515
Mal6g3768 540 SMART ANK_2a 241 270 IPR002110 GO:0005515
Mal6g3768 540 Pfam Ankyrin repeat 309 333 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3768 366 485 Ion Channels AT4G32500 32.500 5.23e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3768 - - gmx:100782444 762.681