Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3751 ATGAATGATCTTCTAACGGAATCGTTTGACATCCCCCGTGGTCGTGGAGTTGGTGACGTTGAGTTGGGAGAATATGGAAGGAATTCAGGAGAGCTCGGCTTGGATAGTTTCTTCAAAAAGGTTCAAGAGCTTGAGAAACAATATGCTAAGCTGGATAACCTTTTGAGAAAGCTCCAGGATGCGCATGAGGAGTCCAAAGCTGTGTCCAAAGCTCCTGCCATGAAGGATATAAAGCAGAGAATGGAGAAAGATGTCGATGAAGTTAAGAAAACTGCATATTTCTTAAAGCACAAAGTTGAAGAGCTGGACAAAGAGAATTTGGCTAATAGGCAGAAGCCTGGTTGTGGAAAAGGATCAGCTGTTGACCGGTCAAGAACAGCAACGACGATTTCGTTGAAAAAGAAACTGAAGGAGAAGATGGCTGAATTTCAGACCCTGAGAGAAGCCATCCATGCAGAATATCGTGATGTCGTTCAGAGACGTGTATTTACAGTAACGGGAGCAAGAGCCGACGAGGAGACAATTGACAGATTAATTGAGACTGGAGACAGTGAACAAATTTTCCAAAAGGCTATACAGGAACAAGGACGAGGCCAGATAATGGACACCCTTGCAGAAATTCAAGAACGACACGAAGCAGTCCGAGATGTTGAGAGAAAACTGCTTGATTTACAACAGACATTTATGGATATTGCAGTGTTAGTTGATGCACAAGGAGACATGCTTGACAACATAGAATCACAGGTTTCAAGTGCAGTAGATCATGTGCAGCGAGGAAACAATAACCTCCAAAAGGCAAAGAAACTGCAAAGAAAGTCAAGAAAATGGATGTGTATCGCCATCATGATACTTCTCATCTTTATTGTAATCATTGTTGTTTCTGTCCTCAAACCATGGGGTACCAAACATGGTACCAAACATGGTGCATAG 930 0.4258 MNDLLTESFDIPRGRGVGDVELGEYGRNSGELGLDSFFKKVQELEKQYAKLDNLLRKLQDAHEESKAVSKAPAMKDIKQRMEKDVDEVKKTAYFLKHKVEELDKENLANRQKPGCGKGSAVDRSRTATTISLKKKLKEKMAEFQTLREAIHAEYRDVVQRRVFTVTGARADEETIDRLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHEAVRDVERKLLDLQQTFMDIAVLVDAQGDMLDNIESQVSSAVDHVQRGNNNLQKAKKLQRKSRKWMCIAIMILLIFIVIIVVSVLKPWGTKHGTKHGA* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3751 309 CDD SynN 34 191 IPR006011 GO:0016020
Mal6g3751 309 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Mal6g3751 309 Pfam SNARE domain 240 292 IPR000727 -
Mal6g3751 309 SUPERFAMILY t-snare proteins 33 259 IPR010989 GO:0016020|GO:0016192
Mal6g3751 309 CDD SNARE_syntaxin1-like 203 265 - -
Mal6g3751 309 Gene3D - 31 159 - -
Mal6g3751 309 Coils Coil 34 71 - -
Mal6g3751 309 PANTHER - 3 297 - -
Mal6g3751 309 PANTHER SYNTAXIN 3 297 IPR045242 -
Mal6g3751 309 SMART SynN_4 29 155 IPR006011 GO:0016020
Mal6g3751 309 SMART tSNARE_6 199 266 IPR000727 -
Mal6g3751 309 Pfam Syntaxin 36 239 IPR006011 GO:0016020
Mal6g3751 309 Gene3D - 195 297 - -
Mal6g3751 309 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3751 Mal-Chr6 109433716 109439305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3751 1 304 SNARE and Associated Proteins AT3G03800 72.787 2.45e-153 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3751 K08486 - gmx:100306329 506.138