Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3750 ATGGAAATTCAATTTGAGGAAGCAAAGAGTTTGAGACCAAAAAGGGTGAACAAATTCAAAGGGAGAAACAAAAAGAGTGAAAAAAGAGACAAGTTTGTTGGGGTGAGACAAAGACCATCAGGGAGATATGTTGCTGAGATAAAGGACACAACACAAAACATAAGAATGTGGCTTGGAACATATGAAACAGCCGAGGAAGCGGCAAGAGCTTACGACGAAGCCGCAACACTTCTTCGCGGTTCCAACACTCGCACCAACTTCGTCACACATGTTTCCTATGATTCCCCTCTCGCTTCTCGGATTAAACATCTTCTCAACAACCGAAAAAAAGGTACCAAACAAGAAGAAGATATGGATGTTAGAAGCAGCACCACTAGCCGTGCTGACACGTCTAGTGGCACTACACATCGTACTAATGCTAGTAGCACCACTAGCCGTGCTGACACGCCTAGTGGCACTACTAGTACTAATGCTAGCGGTACTACCAATAGTACTAGTACTAGCAACGTCACTAGCACCAATGCGGTTATTAGTATTAATTCGAGCAATAACAACATCGATGAAAACATTGAAAACCCGGTTTCTAGTGTGACGGCAATACAAAACACAAAGCTATTTGATGATGCATATAGGCCAGATTTGAGCAAAATCAAAGAGTATGAGACAGGTTCAAAGTCCAATGTTAAATGGGATTTTGGACCTATTTTTGATCATTTTCATTTTGGTCAAGGGTTGGATATGACAAACAGTGATGGAATATTGTATGATATGGTTGATGAAGGAGTTTCAGAATTTGAAAGGATGAAAGTTGAAAGACAAATATCAGCTTCACTTTATGCAATTAATGGTGTGCAAGAATACATGGAAACTGTTCATGACTCCAATGAAGCTTTATGGAATCTTTCACCTTTTTGCTCATTTTTATGTTGA 930 0.3989 MEIQFEEAKSLRPKRVNKFKGRNKKSEKRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTYETAEEAARAYDEAATLLRGSNTRTNFVTHVSYDSPLASRIKHLLNNRKKGTKQEEDMDVRSSTTSRADTSSGTTHRTNASSTTSRADTPSGTTSTNASGTTNSTSTSNVTSTNAVISINSSNNNIDENIENPVSSVTAIQNTKLFDDAYRPDLSKIKEYETGSKSNVKWDFGPIFDHFHFGQGLDMTNSDGILYDMVDEGVSEFERMKVERQISASLYAINGVQEYMETVHDSNEALWNLSPFCSFLC* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3750 309 SUPERFAMILY DNA-binding domain 31 88 IPR016177 GO:0003677
Mal6g3750 309 Pfam AP2 domain 31 80 IPR001471 GO:0003700|GO:0006355
Mal6g3750 309 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Mal6g3750 309 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Mal6g3750 309 CDD AP2 31 87 IPR001471 GO:0003700|GO:0006355
Mal6g3750 309 MobiDBLite consensus disorder prediction 124 170 - -
Mal6g3750 309 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 296 - -
Mal6g3750 309 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Mal6g3750 309 MobiDBLite consensus disorder prediction 14 35 - -
Mal6g3750 309 MobiDBLite consensus disorder prediction 108 123 - -
Mal6g3750 309 Gene3D AP2/ERF domain 30 90 IPR036955 GO:0003700|GO:0006355
Mal6g3750 309 MobiDBLite consensus disorder prediction 105 170 - -
Mal6g3750 309 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 12 296 - -
Mal6g3750 309 SMART rav1_2 31 95 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3750 Mal-Chr6 109429704 109430633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3750 206 309 AP2-EREBP Transcription Factor Family AT5G19790 27.193 2.61e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal6g3750 AP2 2.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3750 K09286 - gmx:100796898 273.863