Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3731 ATGGATATTTGCAACAATGTATCAGTTTCAGGAGAGTTTTCTACCATTGATGACCTTTTCCCTGCTCACAACACTGAAGTGGATTTAGGGATGGAGTGGTTATCAGTATTTGTTGAAGAATGTTTTTCAAGTAAACCAAGTTGTGTCATAGCACCTTCAAGTGTTGAAATTCAAACAAGTACCAACACAAAACCTTCAAACACAATTCCAAAACCTCAACAACAACAATCTTATTTGCAAAATTTTGTTGTTCCTGGAAAAGCAAGAAGCAAGAGAAAGAGACTTTCAGCTCCTAGAACCAAAATTTGGTCACAATCACATTCACATTCACACCCTTTGAGTGAATGTAATTTAATTTCAGACCCTCCTATGTTGAAACAAGCTTATTGGTTAGCTGATAGTGAACTCATTGTTCCTATAATGAAAAACGAGCAAAGAGTCGTCTCTACATCTGCACGTGAGGAGGATACCTTGGTTTATCCAAAAGACGAGAAAAAAAGAGCAAAGAAAGTTGGAAAAGTTGAGAAGGGGAAAGAGAGTTTTGAGAATTTTTGTGAACTTGAAATTATTAAAATTAAGAATAGTGAGAATAATAATGATGATGTTAATGATGATGATGAGGAACATATTCCAAATGCAAGAAGGTGCACTCATTGTTTGTCACAAAGGACCCCACAATGGAGGGCAGGACCATTGGGACCAAAGACACTATGCAATGCATGTGGTGTGAGGTACAAGTCTGGTAGGTTGTTGCCAGAGTATAGGCCAGCAAAGAGTCCTACTTTTGTTAGCTACTTGCATTCAAATTCTCACAAAAAAGTTTTGGAGATGAGAATGCAATCTATTAAGTAG 852 0.3709 MDICNNVSVSGEFSTIDDLFPAHNTEVDLGMEWLSVFVEECFSSKPSCVIAPSSVEIQTSTNTKPSNTIPKPQQQQSYLQNFVVPGKARSKRKRLSAPRTKIWSQSHSHSHPLSECNLISDPPMLKQAYWLADSELIVPIMKNEQRVVSTSAREEDTLVYPKDEKKRAKKVGKVEKGKESFENFCELEIIKIKNSENNNDDVNDDDEEHIPNARRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVLEMRMQSIK* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3731 283 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 213 273 - -
Mal6g3731 283 Pfam GATA zinc finger 216 250 IPR000679 GO:0006355|GO:0043565
Mal6g3731 283 PANTHER GATA TRANSCRIPTION FACTOR 1 281 - -
Mal6g3731 283 SMART GATA_3 210 264 IPR000679 GO:0006355|GO:0043565
Mal6g3731 283 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 281 - -
Mal6g3731 283 CDD ZnF_GATA 215 262 IPR000679 GO:0006355|GO:0043565
Mal6g3731 283 ProSiteProfiles GATA-type zinc finger domain profile. 210 246 IPR000679 GO:0006355|GO:0043565
Mal6g3731 283 Gene3D - 207 283 IPR013088 GO:0006355|GO:0008270
Mal6g3731 283 ProSitePatterns GATA-type zinc finger domain. 216 241 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3731 Mal-Chr6 108922094 108923928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3731 2 278 C2C2-Gata Transcription Factor Family AT5G66320 35.315 6.58e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal6g3731 GATA 1.9e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3731 - - ccaj:109793203 305.064