Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3729 ATGGTGAGTCCAATGAATGAATATGAAAACAAGTGTCCATTTTGTGATACACAATTTGGTGATGCAATGGAAAATTTGAGGGACCATAATAATGATGCTATTGATTTAAGTGGATTTGATTTGTTGTTACAACATTTGGCACAAATTAGTCCTAGTGGATTTGCAAGTGTGAATCCTCCAACAAAGAAGGAAGCAATTGAAGCAATGGAAAATGTGATTAATGATGAGAAATTGCAATGTACTATATGTTTGGAGGATGTTGAGATTGGGAATATTGCTAAAGAAATGCCATGTAAACATAAATTTCATGGTGATTGTATTGTATCATGGCTTAAGCTACATAGCTCTTGTCCAGTTTGTAGGTTTCAAATGCCTATTGAGGATTCAAATGTTTTGGCTAATTTGGAAAATGGAAATAGGGAGAGCCAAAATAATGAGATTGTGAGGGGTAGAAATGGAAGGAGGAATTGGTTTCCAGTGCTTCAATCATTTAATAATTTCCTTCCTTTTCCTTGA 516 0.345 MVSPMNEYENKCPFCDTQFGDAMENLRDHNNDAIDLSGFDLLLQHLAQISPSGFASVNPPTKKEAIEAMENVINDEKLQCTICLEDVEIGNIAKEMPCKHKFHGDCIVSWLKLHSSCPVCRFQMPIEDSNVLANLENGNRESQNNEIVRGRNGRRNWFPVLQSFNNFLPFP* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3729 171 Pfam Ring finger domain 79 121 IPR001841 -
Mal6g3729 171 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 31 170 - -
Mal6g3729 171 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 1 36 - -
Mal6g3729 171 ProSiteProfiles Zinc finger RING-type profile. 80 121 IPR001841 -
Mal6g3729 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 127 IPR013083 -
Mal6g3729 171 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 31 170 - -
Mal6g3729 171 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 36 - -
Mal6g3729 171 SMART ring_2 80 120 IPR001841 -
Mal6g3729 171 SUPERFAMILY RING/U-box 66 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3729 Mal-Chr6 108850324 108851253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3729 37 139 C3H Transcription Factor Family AT1G26800 42.308 4.03e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3729 K11982 - cam:101512035 263.077