Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3688 ATGAGCGAAATCGCAGAGACCCACAAACGCGAATCTGATTCAGAAAACAATGAACAAATTTCTGCATCGAAGAAGTTAAGGGTTGAATCTTGGGAAGAGAATGATTCAAAGGAAATTATGGCTTTCGGCATTGAAGCGGATGTTGCTGAAGATAAAGGGTTGAGACAGAGCATGGAAGATGAATGGGTTGTTCTGATTGATGCAGTTAAAGATTACCCTGGAAATTTGAGATGTGCTCACTTTGCAATTTATGATGGACATGGGGGTCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGGGAATGTTCTTGCATCAGGATTACCACGTGAGTTGTTGGATGTAAAGACTGCTAAAAGATCTATACTTGATGGTTTTCGTAAAACTGATGAGGCTCTTCTTCAAGCAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTATCGCAAATGTAGGAGACGCCAAAGCAGTTTTAGCTCGGTCAACTGTATCTGATGGATCTAAAGATAACTCAGATGGAGTCCCTGCTCTCAAGGCCATTGTTTTGACAAGGGAACATAAACCTATATTCCCACAGGAACGTGCACGCATTCAGAAGGCTGGTGGTATTGTGAGCTCAAATGGACGACTACAAGGGCGTCTTGAAGTATCTAGGGCTTTTGGAGATCGCCAGTTCAAAAAAGTGGGACTTGTTGCAACCCCAGATATCCATTCTTTTGACCTTACTGATAAAGACCGTTTCATCATTCTTGGTTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGACTATCTGTAACAACTGTGAGCCGCCGTCTTGTAAAGGAAGCTGTTCGTGAGCGTCGCTGCAAAGATAACTGCACTGCCATAGTCATTGTATTCAAGCAAAATTAA 969 0.4293 MSEIAETHKRESDSENNEQISASKKLRVESWEENDSKEIMAFGIEADVAEDKGLRQSMEDEWVVLIDAVKDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLASGLPRELLDVKTAKRSILDGFRKTDEALLQASAEGGWQDGATAVCVWVLGQKVFIANVGDAKAVLARSTVSDGSKDNSDGVPALKAIVLTREHKPIFPQERARIQKAGGIVSSNGRLQGRLEVSRAFGDRQFKKVGLVATPDIHSFDLTDKDRFIILGCDGLWGVFGPSDAVDFVQKLLNEGLSVTTVSRRLVKEAVRERRCKDNCTAIVIVFKQN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3688 322 MobiDBLite consensus disorder prediction 1 31 - -
Mal6g3688 322 SMART PP2C_4 35 317 IPR001932 -
Mal6g3688 322 PANTHER PROTEIN PHOSPHATASE 2C 7 316 IPR015655 GO:0004722|GO:0006470
Mal6g3688 322 SUPERFAMILY PP2C-like 42 320 IPR036457 -
Mal6g3688 322 CDD PP2Cc 48 319 IPR001932 -
Mal6g3688 322 Pfam Protein phosphatase 2C 49 307 IPR001932 -
Mal6g3688 322 Gene3D - 27 322 IPR036457 -
Mal6g3688 322 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 7 316 - -
Mal6g3688 322 ProSiteProfiles PPM-type phosphatase domain profile. 45 319 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3688 Mal-Chr6 107913077 107918860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3688 36 271 PP2C-type Phosphatase Gene Family AT1G18030 72.458 1.17e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3688 K17500 - mnt:21396468 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3688 6 107913077 107918860 Mal6g3688 6 107913077 107918860 ECH