Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3662 ATGGCAGAATTAGATCCGTCTAAGAAAGTAGCTGATAGGTATCTCAAACGTGAGGTCCTTGGTGAAGGTACCTATGGTGTTGTTTACAAAGCCATTGATACTCAGACGGGACAGACAGTTGCTATTAAGAAGATTCGAATTGGAAAGCAGAAAGAAGGGGTGAATTTTACAGCTCTTAGAGAAATTAAATTGCTTAAAGAACTCAAAGATCCCAATATAATTGAGTTGATTGATTGCTTCCCACATAAAGGGAATTTGCATCTTGTGTTTGAATTCATGGAGACGGACCTTGAAGCTGTCATAAGAGACCGGAATATTTTCCTTTCACCGGGTGATATAAAATCTTACCTTCAAATGACGCTAAAAGGTCTTGCTCATTGTCACAAAAAATGGATATTGCATAGGGATATGAAACCAAATAATTTGTTGATAGGACCTAATGGACAACTGAAACTTGCAGATTTTGGTTTAGCACGTATATTTGGAAGCCCGGATCGCAGGTTCACTCATCAGGTATTTGCACGGTGGTATAGAGCACCTGAGCTATTATTTGGTACCAAGCAGTATGGCCCAGGAGTTGATGTTTGGGCTGCAGCCTGTATATTTGCTGAGCTTCTTCTTCGTCGACCCTTTTTGCAGGGATCAAGTGATATTGACCAATTAGGAAAGATTTTTGCTGCATTTGGAACTCCATCTCCTTCTCAGTGGCCTGATATGGTATACCTTCCCGATTATGTTGAATATCAATATGTGCCGGCCCCTCCTTTGCGTTCTTTATTTCCAATGGCAACTGATGATGCTTTAGACTTGTTGTCTAAAATGTTCACATATGACCCAAAAGATAGAATTTCAGTGCAACAAGCATTAGAACACAGATACTTCACTTGTCCTCCTCCGCCAACAGATCCAGTTAAGCTTCCAAGACCTGCCCCTAAGAGGGAAATTAAGCCATCAGATTTGAATCCACAAGAGGGTCCCACTGTCTTATCACCTCCAAGAAAGACTAGGAGAGTAATGCCAGGACGTGATGGAATTGAAGGCAATTCTTTGCAAGGAGATAGGGTTGACGATAATCATGGTAACCTCAAACAGACAGCTGGTGATAATACAGGGAAGAATGAGCCTGCAGCAATGTCGCTAGATTTTTCTGTCTTTGGATTAAAACCTCCAAATAGACCAACAATTAACAGCGCTGACAGGTCACATTTAAAAAGAAAATTAGATCTAGAATTCCAGTAA 1239 0.4076 MAELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRIGKQKEGVNFTALREIKLLKELKDPNIIELIDCFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSYLQMTLKGLAHCHKKWILHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSPSQWPDMVYLPDYVEYQYVPAPPLRSLFPMATDDALDLLSKMFTYDPKDRISVQQALEHRYFTCPPPPTDPVKLPRPAPKREIKPSDLNPQEGPTVLSPPRKTRRVMPGRDGIEGNSLQGDRVDDNHGNLKQTAGDNTGKNEPAAMSLDFSVFGLKPPNRPTINSADRSHLKRKLDLEFQ* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3662 412 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Mal6g3662 412 PANTHER CELL DIVISION PROTEIN KINASE 9 357 - -
Mal6g3662 412 Gene3D Phosphorylase Kinase; domain 1 5 94 - -
Mal6g3662 412 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 357 - -
Mal6g3662 412 MobiDBLite consensus disorder prediction 293 412 - -
Mal6g3662 412 MobiDBLite consensus disorder prediction 398 412 - -
Mal6g3662 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Mal6g3662 412 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Mal6g3662 412 ProSitePatterns Protein kinases ATP-binding region signature. 20 49 IPR017441 GO:0005524
Mal6g3662 412 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3662 412 SUPERFAMILY Protein kinase-like (PK-like) 10 299 IPR011009 -
Mal6g3662 412 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3662 412 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3662 Mal-Chr6 107170631 107179499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3662 4 411 Core Cell Cycle Gene Families AT1G73690 74.265 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Mal6g3662 Pkinase 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3662 K02202 - gmx:100814263 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3662 6 107170631 107179499 Mal6g3662 6 107170631 107179499 ECH
Mal6g3662 6 107170631 107179499 Mal6g3662 6 107170631 107179499 PCT