Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3656 ATGGATATCGAGGAGGACATCCGTTCTTTACAGCTTGAGTCAGCAGACATAGCAGAAGACAGCAATGGAGTTGTAAGTCCAGATGATGGAAAGACAGAAGTTGAGGAATCTGTTAATACACATCAAGAAGTTGAGGAATCTATTAATGCAGATGAAGATCCTAAGCAAGAGGTTCAAGCACAATCTATTAAGACTGAGATAAAAGATAAGGAAATTCCTCCAGTGCAAGATGAAGAAGATGACGTGGATATATCTAAGAAAAGACACTTAAATGTTGTTTTTATTGGTCATGTGGATGCTGGTAAGTCTACAACAGGAGGCCAGATACTTTACCTCAGTGGCCAGGTTGATGAACGGACTATCCAAAAATACGAGAAAGAAGCCAAGGACAAAAGTAGAGAAAGCTGGTATATGGCTTACATAATGGACACGAATGAGGAAGAGAGGGCAAAGGGAAAGACAGTTGAAGTTGGAAGAGCACATTTTGAGACGGAGACATCGAGGTTTACGATTTTGGATGCACCAGGTCATAAGAGTTATGTCCCTAACATGATCAGTGGTGCATCTCAAGCTGATATTGGAGTATTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAGAAAGGTGGTCAAACCCGTGAACATGTTCAGCTTGCAAAGACCCTGGGTGTGTCTAAGCTGCTTATCGTTGTTAATAAAATGGATGATCCTACAGTGCAGTGGGCAAAAATAAGGTATGACGAAATTGAGTCAAAGATGATACCATTTCTTAAGCAATCGGGTTACAATGTGAAAAAAGATGTCCAGTTTTTACCCATATCTGGGCTAATTGGTGCAAATCTAAAAACAAGAATGGATAAAAGCATTTGTCCATGGTGGGATGGTCCTTGCCTATTTGAAGCTCTTGACGCCATTGAAGTTCCTCTACGAGATCCTAACGGTCCTTTCAGGATGCCTATACTCGACAAATTCAAAGACATGGGAACTGTTGTTATGGGCAAAGTGGAATCTGGCAGTATCCGTGAGGGAGATTCCTTGTTGATTATGCCAAATAGGGATCATGTGAAAGTTGTTGCCATATATATTGATGAGACTCGGGTCAAACGTGCTGGACCTGGTGAAAATTTACGGGTTAGAGTATCCGGTGTTGAAGAAGAAGACATATCATCTGGGTTTGTCCTGTCTAGTACCGCAAATCCAATACCAGCTGTTACTGAGTTTGTTGCTCAGCTGCAAATTCTTGAATTGCTGGACAATGCAATTTTTACTGCTGGGTACAAGGCTATTCTGCACGTCCACTCTGTAGTTGAAGAATGTGAGGTTATTGAGCTCATGCATCAAATTGATCCAAAGACAAGGAAACCTATGAAAAAGAAAGTTCTCTTTGTGAAGAATGGTGCAGGTGTTGTGTGCCGAATTCAGGTTAGTAACTCCATATGCATCGAGAAATTTTCTGACTTTCCACAACTTGGGAGATTCACTCTTCGTACTGAAGGAAAAACTGTTGCAGTGGGAAGGATCAATAGTTTTTAA 1542 0.4099 MDIEEDIRSLQLESADIAEDSNGVVSPDDGKTEVEESVNTHQEVEESINADEDPKQEVQAQSIKTEIKDKEIPPVQDEEDDVDISKKRHLNVVFIGHVDAGKSTTGGQILYLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETETSRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVSKLLIVVNKMDDPTVQWAKIRYDEIESKMIPFLKQSGYNVKKDVQFLPISGLIGANLKTRMDKSICPWWDGPCLFEALDAIEVPLRDPNGPFRMPILDKFKDMGTVVMGKVESGSIREGDSLLIMPNRDHVKVVAIYIDETRVKRAGPGENLRVRVSGVEEEDISSGFVLSSTANPIPAVTEFVAQLQILELLDNAIFTAGYKAILHVHSVVEECEVIELMHQIDPKTRKPMKKKVLFVKNGAGVVCRIQVSNSICIEKFSDFPQLGRFTLRTEGKTVAVGRINSF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3656 513 Gene3D - 30 311 IPR027417 -
Mal6g3656 513 CDD eRF3_II 318 399 - -
Mal6g3656 513 SUPERFAMILY Translation proteins 310 403 IPR009000 -
Mal6g3656 513 CDD eRF3_C_III 405 510 - -
Mal6g3656 513 Pfam Elongation factor Tu domain 2 331 397 IPR004161 GO:0005525
Mal6g3656 513 Gene3D Translation factors 316 401 - -
Mal6g3656 513 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 87 313 IPR000795 GO:0003924|GO:0005525
Mal6g3656 513 MobiDBLite consensus disorder prediction 1 82 - -
Mal6g3656 513 Pfam Elongation factor Tu C-terminal domain 404 511 IPR004160 -
Mal6g3656 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 322 IPR027417 -
Mal6g3656 513 PRINTS GTP-binding elongation factor signature 186 197 IPR000795 GO:0003924|GO:0005525
Mal6g3656 513 PRINTS GTP-binding elongation factor signature 150 158 IPR000795 GO:0003924|GO:0005525
Mal6g3656 513 PRINTS GTP-binding elongation factor signature 170 180 IPR000795 GO:0003924|GO:0005525
Mal6g3656 513 PRINTS GTP-binding elongation factor signature 91 104 IPR000795 GO:0003924|GO:0005525
Mal6g3656 513 PRINTS GTP-binding elongation factor signature 230 239 IPR000795 GO:0003924|GO:0005525
Mal6g3656 513 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 143 158 IPR031157 -
Mal6g3656 513 PANTHER TRANSLATION FACTOR 2 507 - -
Mal6g3656 513 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 407 511 IPR009001 -
Mal6g3656 513 Pfam Elongation factor Tu GTP binding domain 87 289 IPR000795 GO:0003924|GO:0005525
Mal6g3656 513 PRINTS Yeast eukaryotic release factor signature 75 91 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Mal6g3656 513 PRINTS Yeast eukaryotic release factor signature 314 325 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Mal6g3656 513 PRINTS Yeast eukaryotic release factor signature 193 200 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Mal6g3656 513 PRINTS Yeast eukaryotic release factor signature 228 235 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Mal6g3656 513 Gene3D Translation factors 406 513 - -
Mal6g3656 513 MobiDBLite consensus disorder prediction 29 82 - -
Mal6g3656 513 PANTHER BNAA06G12300D PROTEIN 2 507 - -
Mal6g3656 513 CDD EF1_alpha 91 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3656 Mal-Chr6 106881391 106893524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3656 87 512 Eukaryotic Initiation Factors Gene Family AT5G60390 37.995 3.46e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3656 K03267 - gmx:100784412 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3656 6 106881391 106893524 Mal6g3656 6 106881391 106893524 ECH