Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3645 ATGTCACCAAGGACTGACGAATACGAACAAGATACCGATTCCCTCTCCGCCACCGCCACCTCCGACGATGACGACGACGGTCTCAAAGATGACATGGCCGCCCTCGCACGAGCCTGTACATTCACTGCTGATGAAGACGAAATTCAATCTCAAGAAGAAGATCCGCTTTTATCCGCCGGTGATGCAATTGTCCCTTTCACCGCCACCGCCACTGCAGACTCTGATTCCGATGACCTAGAATGTCTCAAGAGAGTTCAGAGTCTTTACCAACCTACAAACGGTTCTCTTCCTTCGCCGCCGCCGACAACAACAACAGCTGCATCCAATGATGATGATGAAGATGATTTTGAAACTGTTCGCGCTATTTTCAAACGGTTTTCAGCTTATGATGGAGGTGGAAAGGAAGCATGGGCTGAGGGGGAGCAGGATGTTGTCAAGAGCTCCATCTCTAACAACTCAGACGCCGATGAATTGTGTCTTGATTCCCAAGACCCTGATAATGACAGCAAGTTGAAACTGATTGAGCCATGTGATGCTGATGAGACTTGTAAAAATGATCTGGGCTTGTCTTCTCTATTACCGAAGAAAAGATCAAGCTTTCCTCCTTCGGCTCAAGCTTTTATTGATGCGGTCAAGAAGAATAGAGCTCTCCAGAAATTTCTTCGAAGTAAGTTGATTGAAATTGAAGCAAAAATTGAGGAAAACAAAAAGATAAGGGACAAAGTTAAACTCCTTAAGGATTTCCAGGTTTCATGCAATAGAAGAACGGGGAGCGCTTTATCACTGAGAAAGGATCCGCGTGTGCAGTTAATATCATCCAAGAAGTCTTTTGCAACAGATAAATCAAAGAGGCATAATAAGAAAGCATTTGCAATGCGGTATGGCCCAGATGAGAATTCTCGTGTTGCTAACTATAAGATGGTATTGGAAAGATTTCCGCTTTCATTGGATAAGAAAAAATGGTTAAATAAGGACAGGGAAAATCTTTCAAAGGGAATTAAGCAACAATTCCAAGAAACGGTGCTTCAAATTTCAGTAGATAGAATGAGTTCAGAGTGCTCACCTGGAGATGCAAATGACATGGATAGCCTAATTGAATCAGTTAAAGGTCTCGAAATCACACCAGCGAGGATTAGAGAATTTTTACCTAAAGTTAATTGGGATCGATTGGCTTCTATGTATGCTATTGGTCGTACTGGTGCTGAATGTGAATCAAGGTGGTTGAATTGTGAAGACCCTTTGATCAACCATGGCCCATGGACTTCTGAAGAGGATAGATCTCTTTTGATTATTGTCCAAGAGAAGGGCATCAGGAACTGGTTTGACATTGCTGTATCGTTGGCCACAAACAGGATTCCATTTCAATGCTTGGCGCGATTCCAAAGGAGCTTAAATCCTTCGATGTTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTCTGCTGTTGCATATTATGGTCAGTGTGATTGGCAGTCTGTGGCTTCTGTTTTAGAACGGCGGACAGGAACCCAGTGCTCGAATAGATGGAAAAAATCGATTTGTCCTGTGAGGAAAGGGAGCTTTACCCCTGAGGAGGATAGACGCCTTACAGTAGCAGTCATGCTGTTAGGACGGAAATGGCATCAAATAGCCAAATATGTTCCTGGCCGGATCCAATCTCAGTGTAGAGACAGATATCTTAATAGTTTGGATCCTTCTTTGAAATGGGATCGATGGACTGAAGAAGAGGATTTAAGATTAGAAGCTGCAATCACCAAGTATGGAAATTGCTGGTCTAAGGTTGCTGAAGAAGTGCCTCCCCGCACTGATTGTCAATGCCGGAAGAGATGGGAGGGGAGATTTCCTGAACAAGTTCGTCTGCGTAAAGAAGCAAGAAAGAGGCAAAGGTCTCATATTGCCAGTAACTTTGTAGATCGAGAAACTGAACGTCCAGCCCTTACATTGAATGACTTAACTCCTTTGCAAATGGTAGTTCCACCATCCGATGTTGGTGCTAAAAATCTCCGAAGGAAGCGGAAGAGAAAGTCGAGAGGCATTCACACGAAAGAGAGGTCAAAAAAACATGCAAAAGAGACTCAACTTTGTACCGAGGAAGTACAAGATGTGGATCCAAAGAAAGAGAGGCCTAAAAGACATGCAAAAAAGGCATCATTCTGTCCTGAGGATGTACAAGATATAGGTCCCAAGAAAGAGAAGTCTAAAAGACATTCGAAGAAGGCTCGAATTTGTCCCGAGGAAGTAGAATATATAGCAGCATTTAGTGATAAGATCAAGACTTGTGGTGGAGGTGTCCCATTCTTTGCACTAAGCAATGTTTCGAAGAAAATGAAATCTAAAAGAGGTGCTAAAAAGGCTCATCCCGAGGAAGCTGAGAATATAGCATGTAGTGACAAGGTCAAGAACTGTATTAAGAGTTCGGAAAGTCAAGATGGGGACAATTTAACACTTGCATGCCTTTTCCGCAACAAATCAAAGAAGAAACTATCTAAATGTACCAAAAATGCGAGCCAGGCTTCATCTTCCTCTAGGACAAAAACTGTATCTAAGCAGGTTGAAAATCAAATCCCATCTGGCGAGCAAGACGGATGGCCTCTGTCATGTGGTACTAGTGGAACTGAAGATTTGTTAATGCAAACGGAAGTTGATTCTAACAGACAAGTGAGAAAACCAGAAGGTGCAAATGCAGCTAGAAAACCAGAGGATGCACATAATTTGAATGGTAATTGCAATGGTAAGCCTCTTAAGTTCTATGTGAGAAAGAAAACAAAGAAATGTAGTCAAGCTACTGAAGGATGCTGTGCTTTCTCTCCCTCCAAATTGATAAAGGGATCTACATTGCTTCATGGAAACAAGCCAGCCTTGTCAAAAATTGTTGAAGAGGAGACTGTTTTACATGGTGCTGCGGCTGAAGCTGAACCCATGAACATCAATGTCGTTGAAGAAGATACTGTTTTGCATGGTGGTGTGGCTGAAGTTGAACCCACAAACATCAAAGTGGTTGAAGATACTGTTTTGCGCGGTTTTGTTGCTGAAGCTGAACCCACGAACATCAGTGTGGTTGAAGAGGAGACTGTTCTGCATGGTTGTGTGGAAGAAAATGATGACCTTCCTCTTTCCTTCATGCAAAAAAAGACAAAAAGACGGCACAATATTTGCTCCAAATTGAAAAAGGGATCTACATTACTCCATGGAAACAAGCCAACCATCATTTCTTACGGCAGTGAACCATCCATGTCAAACATCAATGTGGTTGAAGAGGAGACTGTTCTGCATGGTGGTATGGCTGATGCTGAACCCACAAACATCAATGTGGAAGAAAATGATGACCCACTTATTTATGAACTGCAAAACAAGACAAGGAGACAACGGAGACGGCACAATATTCAGAAATGA 3402 0.4259 MSPRTDEYEQDTDSLSATATSDDDDDGLKDDMAALARACTFTADEDEIQSQEEDPLLSAGDAIVPFTATATADSDSDDLECLKRVQSLYQPTNGSLPSPPPTTTTAASNDDDEDDFETVRAIFKRFSAYDGGGKEAWAEGEQDVVKSSISNNSDADELCLDSQDPDNDSKLKLIEPCDADETCKNDLGLSSLLPKKRSSFPPSAQAFIDAVKKNRALQKFLRSKLIEIEAKIEENKKIRDKVKLLKDFQVSCNRRTGSALSLRKDPRVQLISSKKSFATDKSKRHNKKAFAMRYGPDENSRVANYKMVLERFPLSLDKKKWLNKDRENLSKGIKQQFQETVLQISVDRMSSECSPGDANDMDSLIESVKGLEITPARIREFLPKVNWDRLASMYAIGRTGAECESRWLNCEDPLINHGPWTSEEDRSLLIIVQEKGIRNWFDIAVSLATNRIPFQCLARFQRSLNPSMLNSEWTEEEDAQLCSAVAYYGQCDWQSVASVLERRTGTQCSNRWKKSICPVRKGSFTPEEDRRLTVAVMLLGRKWHQIAKYVPGRIQSQCRDRYLNSLDPSLKWDRWTEEEDLRLEAAITKYGNCWSKVAEEVPPRTDCQCRKRWEGRFPEQVRLRKEARKRQRSHIASNFVDRETERPALTLNDLTPLQMVVPPSDVGAKNLRRKRKRKSRGIHTKERSKKHAKETQLCTEEVQDVDPKKERPKRHAKKASFCPEDVQDIGPKKEKSKRHSKKARICPEEVEYIAAFSDKIKTCGGGVPFFALSNVSKKMKSKRGAKKAHPEEAENIACSDKVKNCIKSSESQDGDNLTLACLFRNKSKKKLSKCTKNASQASSSSRTKTVSKQVENQIPSGEQDGWPLSCGTSGTEDLLMQTEVDSNRQVRKPEGANAARKPEDAHNLNGNCNGKPLKFYVRKKTKKCSQATEGCCAFSPSKLIKGSTLLHGNKPALSKIVEEETVLHGAAAEAEPMNINVVEEDTVLHGGVAEVEPTNIKVVEDTVLRGFVAEAEPTNISVVEEETVLHGCVEENDDLPLSFMQKKTKRRHNICSKLKKGSTLLHGNKPTIISYGSEPSMSNINVVEEETVLHGGMADAEPTNINVEENDDPLIYELQNKTRRQRRRHNIQK* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3645 1133 Gene3D - 417 468 - -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 688 734 - -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 87 107 - -
Mal6g3645 1133 ProSiteProfiles Myb-like domain profile. 465 516 IPR001005 -
Mal6g3645 1133 Pfam Myb-like DNA-binding domain 574 613 IPR001005 -
Mal6g3645 1133 Pfam Myb-like DNA-binding domain 521 564 IPR001005 -
Mal6g3645 1133 Gene3D - 520 572 - -
Mal6g3645 1133 SMART sant 317 413 IPR001005 -
Mal6g3645 1133 SMART sant 469 518 IPR001005 -
Mal6g3645 1133 SMART sant 416 466 IPR001005 -
Mal6g3645 1133 SMART sant 520 568 IPR001005 -
Mal6g3645 1133 SMART sant 571 619 IPR001005 -
Mal6g3645 1133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 519 566 IPR017930 -
Mal6g3645 1133 ProSiteProfiles Myb-like domain profile. 567 617 IPR001005 -
Mal6g3645 1133 Gene3D - 470 519 - -
Mal6g3645 1133 Gene3D - 574 620 - -
Mal6g3645 1133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 412 468 IPR017930 -
Mal6g3645 1133 ProSiteProfiles Myb-like domain profile. 412 464 IPR001005 -
Mal6g3645 1133 Pfam Myb-like DNA-binding domain 420 481 - -
Mal6g3645 1133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 473 514 IPR017930 -
Mal6g3645 1133 CDD SANT 523 566 IPR001005 -
Mal6g3645 1133 ProSiteProfiles Myb-like domain profile. 520 566 IPR001005 -
Mal6g3645 1133 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 20 1042 - -
Mal6g3645 1133 SUPERFAMILY Homeodomain-like 518 613 IPR009057 -
Mal6g3645 1133 CDD SANT 574 613 IPR001005 -
Mal6g3645 1133 CDD SANT 472 514 IPR001005 -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 670 687 - -
Mal6g3645 1133 SUPERFAMILY Homeodomain-like 448 516 IPR009057 -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 886 909 - -
Mal6g3645 1133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 567 621 IPR017930 -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 660 740 - -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 834 867 - -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 887 901 - -
Mal6g3645 1133 SUPERFAMILY Homeodomain-like 397 446 IPR009057 -
Mal6g3645 1133 CDD SANT 419 464 IPR001005 -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 87 114 - -
Mal6g3645 1133 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3645 Mal-Chr6 106691263 106698104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3645 193 749 MYB-Related Transcription Factor Family AT3G18100 47.478 4.88e-169 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g3645 Myb_DNA-bind_6 4.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3645 K09422 - gmx:778073 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3645 6 106691263 106698104 Mal6g3645 6 106691263 106698104 ECH