Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3636 ATGGAGCTCTGTCTTGATTTGGACAGTGAAAGGAAATTGATGTACATTGAATACTTTATGCGTAGAGTGAATCTGCTTCAGTACTATGAAGTAACACCAGTTGTTGTTTTTGATGGTGGAAATGTTCCTTGCAAGGCAGCAACTGAGAAAGAGAGGAACAAAAAAAGAAATACTTTTCGTGATTTGGCAATGGCTAAGCACAAAGAAGGGAATGTTGATGCTGCATCTGAGCTCTTTCAGAGAGCAGTGAATATTACTCCTGTTATGGCACACAAACTAATTCAGACTCTGAAATCGGAGAACGTTGAGTTTGTTGTAGCTCCATATGAAGCAGATCCTCAGTTAGCATACTTGTCGAACCTTGAAACCGAAAAGGGTGGTATTGCAGCAGTGATCACTGAAGATAGTGATCTATTAACATATGGTTGTCCAGCTGTTATTTTTAAGATGGACCAATCGGGGAATGGTGAAAGAATAGAGTTAGAGAAAGTTTTTTCTGCCGAATCATGTAAGCCTTCGTTTCGGAGTTTTGATATGAAACTTTTCACAGTTATGTGTGTTCTAGCTGGCTGCGATTTTCTTCCATCTGTTCCCGGCATTGGTGTTGCTCGAGCTCATGCCCGAGTTTCTAAGGATCGCAATATCGATCGGATCTTGTCTGTTCTTAAGTATGATAAAGGCGATCAAGTGCCTGAAGATTACGCCAAATCTTTCAGAGATGCACTGGCTGTCTTTCAGCATGCTCGAATATATGATATCAATACTAAAGAGCTCAAGCACCTAAAGCCTCTTCCAGAAAATTTTCTCGAGTCACCTGATGAAAACCTCGATTTTTTGGGACCAGAAATTGCCGCAGCTACAGTCAAAGCAATAGCTGAAGGAAATTTGAATCCATCAACTAAGGAAGCCTTTGATAAATCTGAATGTTCAATGAAAAGTGAAGTTCCTACACCATTTAAACAGCAGAATTGTTTTTCAATCTTTGGCTCCCAGAAAATCGATGAAAATTGCACAGTGACAAGGCTCTCAGATAAAGATAAGTATTCCAATGAAGTATTGACACATCAGAAACCAATCATGTCATTGGAAACAAATGCAACAATTAAAAAAATCATTACATTTGATGAGAATCATTTGAAGGTTCCTAACAATAATCCTTTTAGGATAAGAAAACATGAGGAGGAAATAAATTTATTTCAGAAAGAGGAAACAATGGAAGAAATTTCTATTGTAAGGAGTGTTGAATATATTGATCTTAGTGATTACATGTCACCAAATAATTTTCAAGAAAAAGGGTCTAAAAATTTATCAAAGAAAAGGAAATTACCAATGTCACTAATGAGAAGGTTTTAG 1353 0.3725 MELCLDLDSERKLMYIEYFMRRVNLLQYYEVTPVVVFDGGNVPCKAATEKERNKKRNTFRDLAMAKHKEGNVDAASELFQRAVNITPVMAHKLIQTLKSENVEFVVAPYEADPQLAYLSNLETEKGGIAAVITEDSDLLTYGCPAVIFKMDQSGNGERIELEKVFSAESCKPSFRSFDMKLFTVMCVLAGCDFLPSVPGIGVARAHARVSKDRNIDRILSVLKYDKGDQVPEDYAKSFRDALAVFQHARIYDINTKELKHLKPLPENFLESPDENLDFLGPEIAAATVKAIAEGNLNPSTKEAFDKSECSMKSEVPTPFKQQNCFSIFGSQKIDENCTVTRLSDKDKYSNEVLTHQKPIMSLETNATIKKIITFDENHLKVPNNNPFRIRKHEEEINLFQKEETMEEISIVRSVEYIDLSDYMSPNNFQEKGSKNLSKKRKLPMSLMRRF* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3636 450 Pfam XPG I-region 101 192 IPR006086 GO:0004518
Mal6g3636 450 CDD H3TH_FEN1-like 182 252 - -
Mal6g3636 450 ProSitePatterns XPG protein signature 2. 101 115 IPR019974 GO:0016788
Mal6g3636 450 ProSiteProfiles TPR repeat profile. 56 89 IPR019734 GO:0005515
Mal6g3636 450 Pfam XPG N-terminal domain 14 57 IPR006085 GO:0004518
Mal6g3636 450 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 122 142 IPR006084 -
Mal6g3636 450 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 33 52 IPR006084 -
Mal6g3636 450 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 182 197 IPR006084 -
Mal6g3636 450 SUPERFAMILY PIN domain-like 13 192 IPR029060 -
Mal6g3636 450 Gene3D - 176 248 - -
Mal6g3636 450 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 440 IPR006084 -
Mal6g3636 450 CDD PIN_EXO1 1 165 IPR044752 GO:0046872
Mal6g3636 450 PANTHER 5'-3' EXONUCLEASE FAMILY PROTEIN 1 440 - -
Mal6g3636 450 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 177 306 IPR036279 -
Mal6g3636 450 Gene3D - 3 175 - -
Mal6g3636 450 SMART xpgineu 98 170 IPR006086 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3636 Mal-Chr6 106334018 106342587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3636 19 234 Core DNA Replication Machinery Family AT5G26680 28.959 3.81e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3636 K10746 - gmx:100817932 597.816