Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3596 ATGGCTTCCATCACTGATCGATTCAGGTACGATGTTTTCCTCAGCTTTAGAGGCGAAGATACTCGCCTTGGTTTCACGGGCTATCTCAAGAAAGCTCTTGATGACAAAGGAGTTCGAACTTTCATCGATGATGAGGAGCTTCAAAAAGGAGATGAAATCACACCATCACTTCTAAAAGCAATTGAAGAATCCCAAATCGCCATCGTTGTCCTCTCTAAGAATTATGCTTCTTCCTCTTTTTGCTTACAAGAGCTTTCAAAGATCCTTGATACGATGAAAGAAAAGGTGGGTCGTTCCGTTTTGCCGGTTTTTTATAAGGTTGATCCTACAGATGTAAGAAAGTTGAAAAGGAGTTATGGTGAAGCAATGGAATATCATAAGCCCAGCTCCAATCTGGATAAATGGAAGGACTCTCTTCACCAAGTTGCTAACATGTCCGGCTTTCATTACAAGAAAGGATTATGCGAAAGTTTTAAAACGTGTCGTAAGGTATGCTTCTGGTCATCCACTCTCGCTTTGGAAGTTATGGGTTCTTACTTTTTTAATAAGACAATAGAACAATGTAAAGATGCACTAGATCGTTATGAAAAGGTTCCTCATAAAAAGATCCAAACGACACTGCAATTGAGCTATGATGCTTTGCAGGACGACGAGAAAACTGTTTTTCTTGACATTGCCTGTTGCTTGAAAGGATTTCATTTGACAAGGGTCGAAAATATACTTCATGCTCATCATGGTGAAATCATGAAAGATCACATTAATGTGTTAGTGGAAAAATCTCTTATAAAAATAAGTGAGTCTTGTAATGTGACATTACATGATTTGGTAGAGGATATGGGGAAAGAAATTGTTAGACAAGAATCACCGGAAGATCCTGGAAACCGCAGTAGGCTATGGTCCTATAAAGATATCAAAAAAGTTTTAGAAGAAAATAAGGGAACAAGTAAAATTGAAATCATACATTTCAACCATTGGATTAGTGTAGAATGGGATGGAGAAGCTTTCAAGAAGATGGAAAATCTCAAAACACTAATTTTTAGTAATATTGTTACTTTTTCTAAACATCCCAAACATCTTCCAAATAGTCTAAGAGTGCTGGAATGTCACAAATACTTTTCAATGGGAGGGCTTTCTCACAAAAACTGGCATCTTTCATTAAATCCATTTCAATGGGAGGGCTTTCTCACAAAGAAGTTCCAGAATATGAGAGTTTTATATCTTGATAATAGTGGTTTTTTAGTACAAATACCTGATATATCTGGTCTCCCAAATTTAGAAGAATTTTCAATTCAAAATTGTAGGGATCTAATTGCAATTGATAAATCGGTTGGTTTTTTGCGTAAGCTTAAGATCTTGAGATTTATAAAATGCACTCGAATCAAGAGTGTTCCGCCTCTCAGTATGGCTTCACTGGAAGAACTCGAACTTTCAGATTGTTCTTGTCTAGAAAGCTTTCCTCTCATGGTGAATGGATTTGGTGGACAACTTAAAATCTTGAAGGTTATAAAATGCAGTAAAATCAAAATTATTCCACCTCTCATGTTAGTTTCTCTAGAAGAACTTGATCTTTCATATTGTACTTGTCTTGAGAGTTTTCTGCAAGTGGTGGACGGGTTTGGGGAAAAGTTGAAAACCATGAGTGTTAGAAAATGCATCAAGCTAACGAGTATTCCACTTCTCAAGTTGGATTCATTAGAAGAACTCGATCTTTCAGATTGTACTAGTCTTGAGAGTTTTCCACTTGTGGTGGATGGATTTCTAGGAAAACTTATAACCCTCCTTGTTACAAATTGTCACAATCTCAGAAGTATTCCACGACTCAAGTTGGATTCGCTAGAACTATTTGACCTTTCAAATTGTTACAGGCTTGAGAGTTTTCCACATGTGGTGGGGGGGTTTCTTGGAAAACTTAAAACCCTACTTGTTAGAAATTGTCACAATCTCAGAAGTATTCCACGACTCAAGTTAGATTCTTTAGAAAATCTTGACCTTTCATGTTGTTACATGCTTGAGAGTTTCCCATGTGTGGAGGATGCATTGTTGGATAAACTTAAATTCTTGAATATTGAATATTGCATTATGCTTAGGAATATCCCACGACTCAGATTGACCACGTTGGAACATTTCAATCTTTCATATTGTTATAGTCTTGAGAGTTTTCCAGAATTATTGGTAGAGATGAGAAGTATACCAAGATTCCTATTGGATGAAACTCCCATAAAAATCACTCAGCTTCAAACATTTAAACCATGTCACAGGAAATCTCAAGAACGTATCCTCCAGAGTAAGATAAACGTGAACCCAATACAATCTTCAGATGTAAAGTATGTTTGTGTCGAAAACTGCCATGATGAATATCTGTCAAAAGCTCTCGTGTTGTTTGCTAATGTGAAAGAATTACACCTAACTAACAATCAATTCACAGTTATTCCTAAATCTATCGAAAAATGTCATTTTTTATGGAAACTCGTCTTGGATGATTGTAAGAAACTTCAGGAAATTAAAGGGATTCCTCAATGCTTAAGAATGTTATCTGCACTAAACTGCGAGTCGTTGACTATGTCGTGCAAAAGCAAATTACTAAATCAGGAATTACATAAGGATGGAAACACTTTGTTTCGTTTGCCACGGGTGTCAAAGATTCCAGAGTGGTTTGACCATAAATGGGAGGCAGGATTATCAATTTCTTTCTGGTTTCGTAACATGTTTCCTACCATAGCTCTATGTGTTGTTTCTCCATTGTCATGGTCTCAGAGTAGCTTTGACTTGGCCGGATCTCAACATCGTGCAAGCGTGATCATCAACGGCAATACATTATTTCTCTATACACATGGTTCGAAGATAGGTGGGGGATCACGGGCGGATATGTATCATTTGCATCTATTTCATATGCAAATGGAAAACTTCAATGATAATATGCACAAAGCACTTTTAGAAAATAAGTGGAACCATGCAGAGGTTCACTTTGGATTCCCATTCATGTATAGTGGAATCCATGTATGGAAAGAGAAAAGTAGCATGAAGGATATTCGATTCACCAACCCAGAGAGTGATGCTAACATTGTGTTCACCCAAGATGTTGAAAAACTTCTCCTATGCTCATCTAGCGCAAATGAAGTATATACTTCCCGACCATATAGAAATTGA 3147 0.3696 MASITDRFRYDVFLSFRGEDTRLGFTGYLKKALDDKGVRTFIDDEELQKGDEITPSLLKAIEESQIAIVVLSKNYASSSFCLQELSKILDTMKEKVGRSVLPVFYKVDPTDVRKLKRSYGEAMEYHKPSSNLDKWKDSLHQVANMSGFHYKKGLCESFKTCRKVCFWSSTLALEVMGSYFFNKTIEQCKDALDRYEKVPHKKIQTTLQLSYDALQDDEKTVFLDIACCLKGFHLTRVENILHAHHGEIMKDHINVLVEKSLIKISESCNVTLHDLVEDMGKEIVRQESPEDPGNRSRLWSYKDIKKVLEENKGTSKIEIIHFNHWISVEWDGEAFKKMENLKTLIFSNIVTFSKHPKHLPNSLRVLECHKYFSMGGLSHKNWHLSLNPFQWEGFLTKKFQNMRVLYLDNSGFLVQIPDISGLPNLEEFSIQNCRDLIAIDKSVGFLRKLKILRFIKCTRIKSVPPLSMASLEELELSDCSCLESFPLMVNGFGGQLKILKVIKCSKIKIIPPLMLVSLEELDLSYCTCLESFLQVVDGFGEKLKTMSVRKCIKLTSIPLLKLDSLEELDLSDCTSLESFPLVVDGFLGKLITLLVTNCHNLRSIPRLKLDSLELFDLSNCYRLESFPHVVGGFLGKLKTLLVRNCHNLRSIPRLKLDSLENLDLSCCYMLESFPCVEDALLDKLKFLNIEYCIMLRNIPRLRLTTLEHFNLSYCYSLESFPELLVEMRSIPRFLLDETPIKITQLQTFKPCHRKSQERILQSKINVNPIQSSDVKYVCVENCHDEYLSKALVLFANVKELHLTNNQFTVIPKSIEKCHFLWKLVLDDCKKLQEIKGIPQCLRMLSALNCESLTMSCKSKLLNQELHKDGNTLFRLPRVSKIPEWFDHKWEAGLSISFWFRNMFPTIALCVVSPLSWSQSSFDLAGSQHRASVIINGNTLFLYTHGSKIGGGSRADMYHLHLFHMQMENFNDNMHKALLENKWNHAEVHFGFPFMYSGIHVWKEKSSMKDIRFTNPESDANIVFTQDVEKLLLCSSSANEVYTSRPYRN* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3596 1048 Gene3D - 8 165 IPR035897 -
Mal6g3596 1048 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 148 IPR035897 -
Mal6g3596 1048 Gene3D - 545 589 - -
Mal6g3596 1048 Gene3D Ribonuclease Inhibitor 590 733 IPR032675 -
Mal6g3596 1048 Gene3D Ribonuclease Inhibitor 734 887 IPR032675 -
Mal6g3596 1048 Gene3D Ribonuclease Inhibitor 316 514 IPR032675 -
Mal6g3596 1048 SUPERFAMILY L domain-like 586 886 - -
Mal6g3596 1048 ProSiteProfiles TIR domain profile. 8 166 IPR000157 GO:0007165
Mal6g3596 1048 PANTHER ARCHAEAL ATPASE 171 620 - -
Mal6g3596 1048 PANTHER ARCHAEAL ATPASE 601 990 - -
Mal6g3596 1048 SUPERFAMILY "Winged helix" DNA-binding domain 201 309 IPR036390 -
Mal6g3596 1048 SUPERFAMILY L domain-like 285 674 - -
Mal6g3596 1048 Pfam TIR domain 10 146 IPR000157 GO:0007165
Mal6g3596 1048 SMART till_3 9 145 IPR000157 GO:0007165
Mal6g3596 1048 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 171 620 IPR044974 GO:0006952
Mal6g3596 1048 PANTHER ARCHAEAL ATPASE 20 154 - -
Mal6g3596 1048 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 154 IPR044974 GO:0006952
Mal6g3596 1048 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 601 990 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3596 Mal-Chr6 105388733 105396065 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3596 587 741 WRKY Transcription Factor Family AT4G12020 32.961 2.51e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3596 - - mtr:MTR_6g079140 1162.13