Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3595 ATGAATCTGACTGTCGAGACAATCAAGAAAGTGAAAGCACCATTGTCTGATTGTTTGAATAAAAATGTAGAAAGAGGCAAGCAGAAGGAATCACTGTCCATGTGTATTAAACCAAATGTTGTACGTTCTGTTAGCCGCAGTGAAAGCCCTGATTTGAAAATTCACCTGAGTGGTATATATGTTAAGAATCAGAAAATGACTCCTCAAAAGTCTACGTCATGTTTTAAGCCTGCAAAAAGAGTGCTCGATTTTACACTCACAGAAGGCAGTGATGATTTGGACAATAGAGAAGACACGTCTGAACCTAGCAGAGGATGTTATGAGGACTGCAAATCTTTTGATTCTGTTTCCCCACCTCAGGAGGTAGACGAGAACCTTACTCATTCTTTTGAGAAAACCAACGTAGATCAAACTGGTCTGGATGCATCGGATAACAATTCTTCATCAATGGTGGAACTGGTTAATGTGATTGACTCTATATTTGGCTCTGTCAAAAGAACTTCAATCACAAAAGAGGAGCTTCTGCAAAAGATAATGATGAACTGTTTAGATTTTGTCGAGATTAGAGAAGCTGAAGAACAGATCGAGATTTTAGAAAAGATTGTGCCAGAGCCAGACTGGATTTGCAAGAAGGTGGTTTCTTCTGGAGACACTATGTACTGCGTTAAGAATGCATTGGATTTGGACTAA 690 0.3913 MNLTVETIKKVKAPLSDCLNKNVERGKQKESLSMCIKPNVVRSVSRSESPDLKIHLSGIYVKNQKMTPQKSTSCFKPAKRVLDFTLTEGSDDLDNREDTSEPSRGCYEDCKSFDSVSPPQEVDENLTHSFEKTNVDQTGLDASDNNSSSMVELVNVIDSIFGSVKRTSITKEELLQKIMMNCLDFVEIREAEEQIEILEKIVPEPDWICKKVVSSGDTMYCVKNALDLD* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3595 229 MobiDBLite consensus disorder prediction 89 108 - -
Mal6g3595 229 Pfam DNA replication factor Cdt1 C-terminal domain 137 204 IPR032054 -
Mal6g3595 229 PANTHER DNA REPLICATION FACTOR CDT1 42 229 IPR045173 GO:0003677|GO:0030174|GO:0071163
Mal6g3595 229 PANTHER EXPRESSED PROTEIN 42 229 - -
Mal6g3595 229 MobiDBLite consensus disorder prediction 89 118 - -
Mal6g3595 229 Gene3D - 141 229 IPR038090 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3595 Mal-Chr6 105380778 105388206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3595 131 219 Core DNA Replication Machinery Family AT3G54710 41.346 2.88e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3595 K10727 - gmx:102670055 199.519