Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3592 ATGGCTTCGATCAATAAAGAATTTAAGTACGACGTGCTCCTTAGTTTCAGAGGTGAGGATACTCGTTATGGTTTCACCGGCCATCTCCGGAAAGCTCTTGATGACAAGGGAGTCAAAACTTTCATGGATGATGAGGAGCTTCAAAAAGGAGATGAAATCACACCATCACTTCTCAAGGCAATTGTTGAATCCAAGATTGCCATCGTTGTCCTCTCTAAGAACTATGCTTCTTCCTCCTTTTGCTTAAAAGAACTTTCAAAGATCATTGATACGATGAATGATAAGGTGGGTCGTTCCATTTTGCCGGTATTTTATAAGGTGGATCCTTCTAATGTACGAAGGTTCGAAAAAACTTATGGAGAAGCCATGGATAAACATAAGGCCAGCTCCAATCTCGATAAATGGAAGGACTCTCTTCACCAAGTTGCTGATTTGTCTGGCTTTCATTACAAGAAAGGGGATGGGTATGAGCATGAGTTTATTGGGAAGATTGTTGAACAGGTCTTAAGAAATATAAAACATGTTGCCTTACCTGTTGGTGATTACATAGTTGGACTGGAGCACCAAAAGAAACACGTGACTTCGCTTTTGAGTGTTGGGTCTTATGATGATACAGTCCACATGGTAGGGATCCATGGGATTGGTGGAATAGGGAAAACTACTCTGGCTCTCGAAATTTATAATTCTATTGTCAGTCAATTTCAAGAGAAGAACATAGAGTTAACAAGTGTTGGACAAGGAATTTCAATATTACAACAAAGACTCCACCAAAAGAAGTTGGAGCAATTAGAGGCCATTGTTGGAAGATCTGTTTGGTTTGGTCCCGGTAGTAGAGTTATCATTACGACTCGGGATAAAAGGTTGCTAACATGTCATGGGGTTGAAAGAACATATGAGGTGGGATGGAAAGCTTTAAAAAACGATTATAGTCCAAGCTATAAAGATGTTTTATTAGAAAAAAAGTTTGGAAGAGAATTAATGGATGTGAACGACAAAGATTTTTTAGGTTATGCGCATGTTTTAAAGCGTGCCGTAGCATATGCTTCTGGCCTTCCACTCGCTTTGGAAGTCATAGGTTCTTACTTTTTTAATAAGACAATAGAGCAATGTAATTGTGCACTAGATCATTATCAAAGGGTTCCTGATAAAAAGATCCAAACGACACTACAACTGAGCTTTGATGCTTTGCAGGAAGAAGAGAAGTTTGTTTTTCTTGATATTGCTTGTTGCTTCAAAGGATGGAAATTGACAAGGGTCGAACAAATACTTAATGCTCATCATGGTGATATCATGAAAGATCACATTAATGTGTTAGTGGAAAAATCTCTCATAAAAATAAATGATTGTGGTATTGTCACATTACATGATTTGGTAGAGGATATGGGGAAAGAAATTGTTAGACAAGAATCACCGGAAAATCCTGGAAAACGCAGTAGGTTATGGTCCTCTAAAGATATTGTTCAAGTTTTAGAAGAAAATACAGGAACAAGTAAAATTGAAATCATACATTTCGACCATGGGATTAGTGTAGAATGGGATGGAGAAGCTTTCAAGAAGATGGAAAATCTCAAAACACTTATTTTTAGTAATGATGTTTTTTTTTCTATAGATCCCAAACATCTTCCGAATAGTCTAAGAGTGCTGGAATGTCGCTATCACAAGTATCCTTCATCAGATTTCCATGTGCAAGATGATAGATGCCATTTTTTCGTTCACTCTCCATCAAATCCATTTGAGTGGAAGGGCTTTTTCACAAAGAAGTTCCAGAAAATGAGAGTTTTAAATCTTGATAATTGTGATTGTTTAGCACAAATACCTGATATATCTGGTCTCCCTAACTTAGAAGAATTCTCAATTCAAAATGGAAATTAA 1872 0.3713 MASINKEFKYDVLLSFRGEDTRYGFTGHLRKALDDKGVKTFMDDEELQKGDEITPSLLKAIVESKIAIVVLSKNYASSSFCLKELSKIIDTMNDKVGRSILPVFYKVDPSNVRRFEKTYGEAMDKHKASSNLDKWKDSLHQVADLSGFHYKKGDGYEHEFIGKIVEQVLRNIKHVALPVGDYIVGLEHQKKHVTSLLSVGSYDDTVHMVGIHGIGGIGKTTLALEIYNSIVSQFQEKNIELTSVGQGISILQQRLHQKKLEQLEAIVGRSVWFGPGSRVIITTRDKRLLTCHGVERTYEVGWKALKNDYSPSYKDVLLEKKFGRELMDVNDKDFLGYAHVLKRAVAYASGLPLALEVIGSYFFNKTIEQCNCALDHYQRVPDKKIQTTLQLSFDALQEEEKFVFLDIACCFKGWKLTRVEQILNAHHGDIMKDHINVLVEKSLIKINDCGIVTLHDLVEDMGKEIVRQESPENPGKRSRLWSSKDIVQVLEENTGTSKIEIIHFDHGISVEWDGEAFKKMENLKTLIFSNDVFFSIDPKHLPNSLRVLECRYHKYPSSDFHVQDDRCHFFVHSPSNPFEWKGFFTKKFQKMRVLNLDNCDCLAQIPDISGLPNLEEFSIQNGN* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3592 623 Gene3D Ribonuclease Inhibitor 487 623 IPR032675 -
Mal6g3592 623 PRINTS Disease resistance protein signature 586 602 - -
Mal6g3592 623 PRINTS Disease resistance protein signature 208 223 - -
Mal6g3592 623 PRINTS Disease resistance protein signature 348 362 - -
Mal6g3592 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 407 IPR027417 -
Mal6g3592 623 SUPERFAMILY "Winged helix" DNA-binding domain 383 491 IPR036390 -
Mal6g3592 623 SMART till_3 9 145 IPR000157 GO:0007165
Mal6g3592 623 SUPERFAMILY L domain-like 455 621 - -
Mal6g3592 623 PANTHER ARCHAEAL ATPASE 20 621 - -
Mal6g3592 623 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 148 IPR035897 -
Mal6g3592 623 Gene3D - 319 397 IPR042197 -
Mal6g3592 623 ProSiteProfiles TIR domain profile. 8 172 IPR000157 GO:0007165
Mal6g3592 623 Pfam TIR domain 9 172 IPR000157 GO:0007165
Mal6g3592 623 Gene3D - 177 266 IPR027417 -
Mal6g3592 623 Gene3D - 3 176 IPR035897 -
Mal6g3592 623 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 621 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3592 Mal-Chr6 105310054 105314166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3592 10 623 WRKY Transcription Factor Family AT4G12020 26.979 5.20e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3592 - - mtr:MTR_6g079140 1009.98