Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3583 ATGATGGGTTACATTACCCATCTGACATGTCAAACATATAACACCTTAGAGATGGATCTAAACTTTAAAATGTCATTTAATGAGTTTTCTCAATTTGACCATGGGTCTTGCGGTAATGGTTTAGTTTTTGAAGAAGGAATAGAGGATATGGAAACTTATAAGAAGATAAGGGAATTGACAGATGATGATATAAGAGGATTGGAATTTGATTCAGAGGAAAAAGCGGCACGTTTTTATGACATATATGCACGATGTCACGGGTTTGCGATGCGAAATGATGATGTAGACAAGGATTTAGAAGGGAATATAATTGCTCGTCGATTAGTATGTAATAGAGAGGGTAAGAGTAAATCGAAGGGTAAAAATCCGAGGCCAACCACGCGAACTAAGTGTCATGCAAGGCTTCAAGTAACTTTAAATCCCTTTCACAACCACGACTTAACTCCGACACAATATGTTCATTTGATTCCTATGTATCATCGATTGAGTGAATCTGATAAAGCCCTTGTTGACGGCCTTCGCACACACGGTGTTAGAACTTGTCACATTTTGGGTTTTATGCTGGCTCAAAAAGGTGGTTATGAGAGTCTGGGATTTTGA 600 0.3833 MMGYITHLTCQTYNTLEMDLNFKMSFNEFSQFDHGSCGNGLVFEEGIEDMETYKKIRELTDDDIRGLEFDSEEKAARFYDIYARCHGFAMRNDDVDKDLEGNIIARRLVCNREGKSKSKGKNPRPTTRTKCHARLQVTLNPFHNHDLTPTQYVHLIPMYHRLSESDKALVDGLRTHGVRTCHILGFMLAQKGGYESLGF* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3583 199 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 44 138 - -
Mal6g3583 199 Pfam FAR1 DNA-binding domain 77 145 IPR004330 -
Mal6g3583 199 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 44 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3583 Mal-Chr6 105080427 105082873 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g3583 FAR1 7.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3583 - - ccaj:109792835 160.999