Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3577 ATGGCCATTCAACTATCCTCCTCCTCCTCCTCCTCCAGTTCCTTCACCTACGATGTGTTCATAAGCTTTCGAGGTGTTGATACTCGTTACGGTTTCGCCGGATATCTGTGGAAAGCTTTGAATGACAGAGGAATCCACACCTTCATCGATAACGGTGAGATTTCCAAAGGGCACGAAATCGCACCATCCCATATCAAAGCCATTGAAGAGTCCAGGATTGCCATTATCGTGTTCTCACAAAACTATGCCTCTTCTTCATTTTGCTTGGATGAACTTGCCATTATCGTTCAAAACTTCAAGAAGAGCCACAATCCTCTACTTATTTTTCCGGTTTTTTACTGCATCGATCCTTCTGATGTGCGACAACAACGTGGATCTTATGGTGAAGCAATGGCAAGGGATGAGGAGAGATTCCAAAACAATCAAGACCATCCTAATTTAAATGAAAGGCTTCAAAAATGGAAGATGGCTCTAACTCAAGTAGCTAACTTGTCCGGGTGGAATTTCACTCACGGGGAGGGGTATGAATTTGAGTTTATAGACAAGATTGTGGAAGAGATTTCCAGGAAGTTTGATCGTGTTCCTTTACATAACGCCGATTACACAGTTGGATTGGATACTCGATTGGGAGAATTAGGAAATGCTAGTAAAGGAGTTTCAGTAATAAAGCATAGGCTCCACCGAAAGAAAGTTCTTCTCATCCTAGATGATGTGGCCACACTAGAGCAATTGGAGGCTTTGGTTGGAGGACTTGATTGGTTTGGACCTGGTAGCATAGTTAACATTACAACACGAGACATGCATTTGCTAGAAGTTCACGGGGTTGAGAGAAGATACGAGGTACAGGAATTAAATGACGTAGGTGCTCTTAAGTTTCTTAGCCGCAAGGTGTTTAAGCAAGGGATTGTTGATCCAAATTACAAAGAACTTTTAAGCCAAGTAGTAACTTATGCTTCCGGAATTCCATTGGCCTTGGAAGGCATAGCTTTAAGCTTGTTGGGAAAAAGTGTTGACCAATGTAAACATGTATTAGATCAGTTTGAACGGATTCCTCCTCACGACATTCAAGGAGCACTTAAATTAATCTTTGATGCTTTGAATCAAGAGGAAAAGAACATTTTTCTCGACATTACTTGCTTCTTCAAAGGATATGAATTGTTAGATGTTAAGGATATACTCTGTGCTCGTTATGGCCACTGCTTGAAATATCATATTGAAGTGTTGATTGAGAAGTCTATCATGAATATCAGTTTGGATGGTAAGGTGACACCACATCCCTTGATAGAGAGCATGGGTAAAGAAATTGTTCGCAAGGAATCACCAAAAGATCCTGGGCGACTTAGTAGATTATGGCTCCCTGAAGATATAGTTCAAGTCTTAAAAAATAATAAGATCACAAACATTAGTTATTCAATGAATCTAAAAAGTAAACTTTTATTACTTATAAATGTGACCCGAGAGTATAATCTTTGTTCAACAATGACAGAGGAATTTAGTAAAATAGCATTTAACCTGGCCACATGTTCCTAG 1530 0.3974 MAIQLSSSSSSSSSFTYDVFISFRGVDTRYGFAGYLWKALNDRGIHTFIDNGEISKGHEIAPSHIKAIEESRIAIIVFSQNYASSSFCLDELAIIVQNFKKSHNPLLIFPVFYCIDPSDVRQQRGSYGEAMARDEERFQNNQDHPNLNERLQKWKMALTQVANLSGWNFTHGEGYEFEFIDKIVEEISRKFDRVPLHNADYTVGLDTRLGELGNASKGVSVIKHRLHRKKVLLILDDVATLEQLEALVGGLDWFGPGSIVNITTRDMHLLEVHGVERRYEVQELNDVGALKFLSRKVFKQGIVDPNYKELLSQVVTYASGIPLALEGIALSLLGKSVDQCKHVLDQFERIPPHDIQGALKLIFDALNQEEKNIFLDITCFFKGYELLDVKDILCARYGHCLKYHIEVLIEKSIMNISLDGKVTPHPLIESMGKEIVRKESPKDPGRLSRLWLPEDIVQVLKNNKITNISYSMNLKSKLLLLINVTREYNLCSTMTEEFSKIAFNLATCS* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3577 509 Pfam TIR domain 17 191 IPR000157 GO:0007165
Mal6g3577 509 PRINTS Disease resistance protein signature 225 239 - -
Mal6g3577 509 PRINTS Disease resistance protein signature 318 332 - -
Mal6g3577 509 Gene3D - 10 198 IPR035897 -
Mal6g3577 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 212 IPR044974 GO:0006952
Mal6g3577 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 216 464 IPR044974 GO:0006952
Mal6g3577 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 377 IPR027417 -
Mal6g3577 509 ProSiteProfiles TIR domain profile. 15 191 IPR000157 GO:0007165
Mal6g3577 509 SMART till_3 16 164 IPR000157 GO:0007165
Mal6g3577 509 SUPERFAMILY "Winged helix" DNA-binding domain 354 461 IPR036390 -
Mal6g3577 509 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 19 212 - -
Mal6g3577 509 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 216 464 - -
Mal6g3577 509 Pfam NB-ARC domain 220 349 IPR002182 GO:0043531
Mal6g3577 509 Gene3D - 283 367 IPR042197 -
Mal6g3577 509 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 167 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3577 Mal-Chr6 105048017 105051949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3577 205 464 WRKY Transcription Factor Family AT5G45050 36.122 1.15e-39 152