Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3571 ATGGCCAATCAACTATCTAGATCCTACACCTACGATGTGTTCATAAGCTTTCGAGGCGAGGATACTCGTAACGGTTTCACCGGATATCTGTGGAAAGCTTTGAAGGACAAAGGAATCCACACCTTCATCCATGATGACCAGGAGATTTCCAAAGGGGAACAAATCACACCATCCCTTATGAAAGCAATTGAAGAGTCCAGGATTGCCATTATCGTGCTCTCACAGAACTATGCCTCTTCATTTTGCTTGGATGTACTTGTCCATATTGTTTACAACTTCCAGCACAGCAACACCCCTCAACTTATTTTACCGGTTTTTTACTGCATCGATCCTTCTGATGTGGGACAACATCATGGATCTTATGGTGAAGCAATGGCAAGGTATGAGAAGAGGTTCCAAAACAATCAAGACCATGAAAGGCTTCAAAAATGGAAGATGGCTCTAACTCAAGTAACTAACTTGTCCGGGTGGAATTTCAATGGCAGGGATGGGGATGGGTATGAATTTCAGTTTATCGACAAGATTGTAGAAGAGGTCTCCAAGAAGATTGATCGTGTTCCTTTACATATTGCCGATTACACAGTTGGATTGGTTCCTCGATTGGAAGAAGTGTGCCCGCTTTTGGAGTTGGAATCTCCTGAAGTCCTTGTGGTGGGGATCTATGGGGTTGGTGGAATAGGGAAAACAACACTTGCTCGAGCACTTTATAATATGATTGAACACCAATTTGAAGCCTCATGTTTTCTTTCCAATGTTAGAGAAAGTTCAAATAGACATGGATTAGTGCACCTCCAAAATATGCTTCTTTCCAATATGCTTGGATTGAAAATTAATTTAGGAGATGCTAGTGAAGGAGTTTCACTAATAAAGCAGAGGCTTCATCGAAAGAAAGTTCTTCTCATCCTAGATGATGTGGACGCACTAGAGCAACTGGAAGGCTTGGTTGGAGGACTTGATTGGTTTGGTTCTGGTAGCCGAGTTATTGTTACAACACGGGATAGACATTTGCTAGCATTTCACAGGGTTGAGATAACATATGAGATACAAGAGTTAAATCGCGTAGATGCTCTTGAGTTGCTTAGCCACAAGGTTTTTAAACAAGGCATTGTTGACCCAAATTACACAGAACTTTTAAACCGAGTAGTAAATTATGCTTCCGGGCTTCCATTGGCCTTGGAGGTAATAGGTTCAAGCTTGTTTGGAAAAAGTGTTGACCAATGGAAACATGCATTAGATCGGTTTGAACGGATTCCTCCTAATGACATTCAAAGTACACTTAGAGTAAGTTTTGATGCTTTGGATCAAGAGGAAAAGAACATTTTTCTCGACATTACTTGTTGCTTCAAAGGATATGAATTGGCAGATGTTGAGGACATACTCCGTGCTCGTTATGGCCACGACTTGAAATATCATATAGGAGTGTTGATTGACAAGTGTCTCTTAAATATCAGTTCTGATGGTAAGGTGACACCACATCCCTTGATAGAGAGCATGGGTAAAGAAATTGTTCGTGAGGAATCACCAAAAGATCCTGGGAGACGTAGTAGATTATGGTTTCCTGAAGATATAGTTCAAGTCTTAAAAAATAATAAGGTATGGTTATTACAGGGAAGTAGTAATATTGAAATCATACATCTGGACTCCCCCTTAATTGAGTATGAAAAAGAAATACGATGGGATGGAGAGGCCTTTAAGAAGATGCCAAACCTCAAAATACTTATTATTAGAAAATGTCATTTCTCCAAAGCTCCCAAGTATCTTCCAAACAGTTTAAAAGTATTGGAATGGTGGAATTATCCTTCAGAGAAGTTACCATCTGATTTTGATTCAAAGCAACTTGTCATATGCAGGCTTCCAAAGCTGACTGAGTTATTAAAGGCAAGTATACGGTTTACCATCTAA 1902 0.3991 MANQLSRSYTYDVFISFRGEDTRNGFTGYLWKALKDKGIHTFIHDDQEISKGEQITPSLMKAIEESRIAIIVLSQNYASSFCLDVLVHIVYNFQHSNTPQLILPVFYCIDPSDVGQHHGSYGEAMARYEKRFQNNQDHERLQKWKMALTQVTNLSGWNFNGRDGDGYEFQFIDKIVEEVSKKIDRVPLHIADYTVGLVPRLEEVCPLLELESPEVLVVGIYGVGGIGKTTLARALYNMIEHQFEASCFLSNVRESSNRHGLVHLQNMLLSNMLGLKINLGDASEGVSLIKQRLHRKKVLLILDDVDALEQLEGLVGGLDWFGSGSRVIVTTRDRHLLAFHRVEITYEIQELNRVDALELLSHKVFKQGIVDPNYTELLNRVVNYASGLPLALEVIGSSLFGKSVDQWKHALDRFERIPPNDIQSTLRVSFDALDQEEKNIFLDITCCFKGYELADVEDILRARYGHDLKYHIGVLIDKCLLNISSDGKVTPHPLIESMGKEIVREESPKDPGRRSRLWFPEDIVQVLKNNKVWLLQGSSNIEIIHLDSPLIEYEKEIRWDGEAFKKMPNLKILIIRKCHFSKAPKYLPNSLKVLEWWNYPSEKLPSDFDSKQLVICRLPKLTELLKASIRFTI* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3571 633 PRINTS Disease resistance protein signature 217 232 - -
Mal6g3571 633 PRINTS Disease resistance protein signature 292 306 - -
Mal6g3571 633 PRINTS Disease resistance protein signature 385 399 - -
Mal6g3571 633 PRINTS Disease resistance protein signature 565 581 - -
Mal6g3571 633 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 625 IPR044974 GO:0006952
Mal6g3571 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 444 IPR027417 -
Mal6g3571 633 Gene3D Ribonuclease Inhibitor 520 630 IPR032675 -
Mal6g3571 633 Gene3D - 8 184 IPR035897 -
Mal6g3571 633 Pfam NB-ARC domain 207 425 IPR002182 GO:0043531
Mal6g3571 633 SMART AAA_5 214 355 IPR003593 -
Mal6g3571 633 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 157 IPR035897 -
Mal6g3571 633 Pfam TIR domain 11 183 IPR000157 GO:0007165
Mal6g3571 633 SUPERFAMILY "Winged helix" DNA-binding domain 421 528 IPR036390 -
Mal6g3571 633 Gene3D - 350 434 IPR042197 -
Mal6g3571 633 SMART till_3 10 154 IPR000157 GO:0007165
Mal6g3571 633 Gene3D - 185 345 IPR027417 -
Mal6g3571 633 ProSiteProfiles TIR domain profile. 9 183 IPR000157 GO:0007165
Mal6g3571 633 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 14 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3571 Mal-Chr6 104830379 104833185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3571 4 619 WRKY Transcription Factor Family AT4G12020 29.310 4.20e-66 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3571 - - gmx:100780257 720.309