Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3560 ATGAAAAAATCATTCAAACATTTCATCAAACACTTTGGAGTGCAAAATATACATATTTGGCTCATTATGTACGAATATGAATTAATTCAAAAGATCACTGAAGAAATGTCTAGGAAATTAAATCTTACCCCTTTACACATAGCTGATCATCCAGTTGGATTGAATTACAAAATTTCACAAATAATGTCACTTCTAGAAATCAAGTCTAATGATGTTGATGATAAAGTTTTCATGGTTGGAATTTGTGGAATTGGTGGCATTGGTAAAACAACACTAGCTAGAGCAGTATATAACTCAATTTCTAGAAAGTTTGATAGTTCAAGTTTTCTTGTTGATGTAAGAGAAAATTCAATGAAACATGGTCTAGTACACTTGCAAGAGACACTTTTGCTTCATTTGCTAGATGAAAATATCAAATTGGATGATGTGAGCAAAGGAATTCCTATAATAAAAAGACGGCTTCACAACAAGAAGGTTCTTTTGATTCTCGATGACGTTGATAATCTTCAACAGTTAAGATCATTGATCATCATAACAACAAGAGATAAACATTTGCTAGCTGCTCATGGAGTTGAAAAATTATATGAAGTGGAAGAATTGAATGATCATGAATCTCTTAAACTGTTTAGTATGAATGCTTTTAGGAAAAATGTACCTGATGCAAGTTATGATGAGATAGCAAAAAGTGTAGTGCAATATGCAAAAGGCCATCCATTAGCTTTGAATGTAATAGGATCAGATTTATTTGGCAAAACAATAGATGAATGGACAAGTGCATTGAATAAATATGAAACAATAGATGAATGGACAAGTGCATTGCATAAAGTAACTTATGATAATTTGGATGATAATGAAAAGGAAATTTTCCTTGATATTGCTCGTTTCTTCAAAGAATATCCGAAGGCGGATGTAGAAAAGACACTAGTTGAGAGTCGTTTTTATTCGAAATATGGCATTGGAGTACTTGTTGACAAATCTCTTGTAACAATTGGTGAATCCAATTCAGTTAAGATGCATGATCTTGTACAAGACCTAGGTAAAGACATTGCTCGAAAGGAGTCGCCGTTTGATCCGAGCAAACGCAGAAGATTATGGCATCATGAGGATGTTCTTGAAGTCTTGACAGAAAACAAGGTGAATGGACAAGTTTCTGGAGCACCCCAAAATCTTCCAAATAATTTGAGATTGCTTGAATGGAACAAATATCCTTTAACATCTCTACCTGATAATTTTCATCCAAAGACACTTGTTGTACTCAATTTTCCAAAGAGTCATATTACAATGGATGAGCCATTTAAGAAGTTTGAGCACTTGACTTTTATGAACTGCAGTGATTGTGACTCTCTAACAAAACTACCTGATGTATCTGCAACCCCAAATCTAACAAGAATTCTTGTTAATAATTGTCCAAACTTGGTTGACATTCATGAATCTGTTGGAGATCTTGACAAACTAGTCACATTGAGTACTGAAGGATGCCCTAAACTCAAGAGTTTTCCGCGTGGCCGGAGATCAAAATATCTGGAATACCTTAATCTTAAAAAGTGTTCTAACATTAATGATTTCCCAGATGTATTGGCAAAAGTGAAAAATATGAAAAATATTGACATAGGAGGGACAACCATTAAAAAATTTCCAAGTTCAATTGAAAACTTCAATGACCTTGAAGAATTAGTATTGACATCATGCTCAAATGTTGAGGATCTACCTAGTAACACAGAAATGTTTCAAAATATTGAAGAGCTTAATGTGGAAGGATGTCCACAACTTCCAAAACTTCTACGAAATCTCAAAAATTGTAATCTATCAGATGAAGATCTTGAGTTAATTCTCAAATGTTTTCTACAATTAAAGCGGTTGATCCTATCAGATAGCAATTTCTTGACCATTCCTGATTGCATTGAAGACCTTTCTCATCTTTTGCTTCTTAACATAGAAAATTGCAAGCATCTTAGAGAAATTTCGGTTCTTCCACCATACTTGCAATATGTAGATGCAAGGAAGTGTATGGCTTTGACTCCTCAATCATCAGAAGTACTATTGAGTCAGGCATTTCAGGAGGTTGAGTACATAGACATAGTTGTTCCAAGGACAAAAATTCCATCTTGGTTTGATCATTGTAATAAAGGAGAGTCTATCGCCTTTTGGATTCGTAAAAATTTCCCTGCAATTGCTCTATTTTTTCTTTTAAGTGGTGAAGATGAAAGGAAAACCAATTATACATGTGAATTCTACATACTAATCAATGGAATGCAAGTATACCAAGGAAAAAGCGAGTGGACGGTTGATCATATATGGCTTTTTGATTTGCGAATTCACCTCACCGCGAGCGAGATGAATATCCACCATGTTTCCTTCATAAGTCCTGAACCTCATGGCTCAAATATGGTCCATGAAAATGATAATTTGGATATCTTTGATGAAGTAAGTGAAGATATTGTTTTTCCTTCAATATTAGCTAAATATTTAAACAAGACTATATTAGAGGTAATGAGTGATCTTCAATCCAGCAAGAGAAAAGATGATAATGGATATGATTATGATGAGGAGTTTGAACTAGACAGTGGCACAGACATTGATAGCCAGTACATAGAAGAGGATCAACATTCAGCTTCCCTTAATCATCAAATACTCGAAATCTTTGAACTTGTGAATAAAGACAATGGAAAAGAGACCAATTCCAGTAAAATCTTACATGATCCTTCAACTGAAACACGAAAATCAAAGTTGAAGGAGATAGAAAATTTTGCACCAGAATCAAGTACCATTGCATCAACAAGCAGAGACAAGGGAACACAGTTAGTTGATAAAATCACTTCTGTCGAAAAAATCAATTTTGATTCAATAAAAAGCAAACAACCTATCCTAAATGCAGAATCCTACATAAACATTGTTGAGTCCACCATAAATGAAGAAAATATGGAAGAATTTTATGCTTCACTTGAAGAAGAAACAACTTCTCCTTTACAAGTCCAACCCAACAATGATACTATGAGAAATAGGCCTAGTGAAGAAACTCAGAAAGCACCGCAGATTCTACAAGACTTTGTCACAAAAAAATTCTCTCTTTTGTTGCATCCGGGACGTTCGGGATTGATGAAAGATATTCTAAAGTATCTCATCAGTTTAACACCAGATGTAGGATTGTCTCTGAAAACAAAATCAGTAATACTGCAACTTTCACATAGTTTTGCTCAGTGGAGTTTGGATTACAACAATGCAAATCTTAAACTTGAGTCAGCAACTACTGATCTATCAAAATCTGAGAAAGTGAAGGATTGTCTTAAAGATAATGTGAAAGATTTCCGAGAAATGGACATGGTCGAGAAGTGTTTTTCAAATCAGTTAGCCTGCTTGCAGGAAGAGAAGAGAGAACTTGAAGAGAAAATCAATGCCATAAAAGCTGAGATTGCAGATTTTACAGCACAGAGAGAAATGGTTGTAAAGAGAAAGACAGAATTGTTTTGCAAAGGTAATGTGATGAAAGCCGAAAGGGATGATTTGAGGAACAAAGTTCCAAGGTTAAAAGCTGAGAAGGAATTGGCAAAGATAATACAAGCTAATATTGAAGAAGAGTGGTCAAAGCTTGGAGAACAATTCATTGGAAGCACCAATTTTGAAGAGTGGAGACCAACAGTTTCAAGTTAG 3648 0.3454 MKKSFKHFIKHFGVQNIHIWLIMYEYELIQKITEEMSRKLNLTPLHIADHPVGLNYKISQIMSLLEIKSNDVDDKVFMVGICGIGGIGKTTLARAVYNSISRKFDSSSFLVDVRENSMKHGLVHLQETLLLHLLDENIKLDDVSKGIPIIKRRLHNKKVLLILDDVDNLQQLRSLIIITTRDKHLLAAHGVEKLYEVEELNDHESLKLFSMNAFRKNVPDASYDEIAKSVVQYAKGHPLALNVIGSDLFGKTIDEWTSALNKYETIDEWTSALHKVTYDNLDDNEKEIFLDIARFFKEYPKADVEKTLVESRFYSKYGIGVLVDKSLVTIGESNSVKMHDLVQDLGKDIARKESPFDPSKRRRLWHHEDVLEVLTENKVNGQVSGAPQNLPNNLRLLEWNKYPLTSLPDNFHPKTLVVLNFPKSHITMDEPFKKFEHLTFMNCSDCDSLTKLPDVSATPNLTRILVNNCPNLVDIHESVGDLDKLVTLSTEGCPKLKSFPRGRRSKYLEYLNLKKCSNINDFPDVLAKVKNMKNIDIGGTTIKKFPSSIENFNDLEELVLTSCSNVEDLPSNTEMFQNIEELNVEGCPQLPKLLRNLKNCNLSDEDLELILKCFLQLKRLILSDSNFLTIPDCIEDLSHLLLLNIENCKHLREISVLPPYLQYVDARKCMALTPQSSEVLLSQAFQEVEYIDIVVPRTKIPSWFDHCNKGESIAFWIRKNFPAIALFFLLSGEDERKTNYTCEFYILINGMQVYQGKSEWTVDHIWLFDLRIHLTASEMNIHHVSFISPEPHGSNMVHENDNLDIFDEVSEDIVFPSILAKYLNKTILEVMSDLQSSKRKDDNGYDYDEEFELDSGTDIDSQYIEEDQHSASLNHQILEIFELVNKDNGKETNSSKILHDPSTETRKSKLKEIENFAPESSTIASTSRDKGTQLVDKITSVEKINFDSIKSKQPILNAESYINIVESTINEENMEEFYASLEEETTSPLQVQPNNDTMRNRPSEETQKAPQILQDFVTKKFSLLLHPGRSGLMKDILKYLISLTPDVGLSLKTKSVILQLSHSFAQWSLDYNNANLKLESATTDLSKSEKVKDCLKDNVKDFREMDMVEKCFSNQLACLQEEKRELEEKINAIKAEIADFTAQREMVVKRKTELFCKGNVMKAERDDLRNKVPRLKAEKELAKIIQANIEEEWSKLGEQFIGSTNFEEWRPTVSS* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3560 1215 Coils Coil 1109 1143 - -
Mal6g3560 1215 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 610 1059 - -
Mal6g3560 1215 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 380 502 IPR044974 GO:0006952
Mal6g3560 1215 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 376 IPR044974 GO:0006952
Mal6g3560 1215 SMART AAA_5 75 200 IPR003593 -
Mal6g3560 1215 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 610 1059 IPR044974 GO:0006952
Mal6g3560 1215 Pfam NB-ARC domain 73 264 IPR002182 GO:0043531
Mal6g3560 1215 PRINTS Disease resistance protein signature 153 167 - -
Mal6g3560 1215 PRINTS Disease resistance protein signature 635 651 - -
Mal6g3560 1215 PRINTS Disease resistance protein signature 78 93 - -
Mal6g3560 1215 PRINTS Disease resistance protein signature 234 248 - -
Mal6g3560 1215 Gene3D Ribonuclease Inhibitor 505 719 IPR032675 -
Mal6g3560 1215 Gene3D Ribonuclease Inhibitor 333 504 IPR032675 -
Mal6g3560 1215 Gene3D - 34 193 IPR027417 -
Mal6g3560 1215 Gene3D - 199 282 IPR042197 -
Mal6g3560 1215 MobiDBLite consensus disorder prediction 984 1008 - -
Mal6g3560 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 292 IPR027417 -
Mal6g3560 1215 SUPERFAMILY L domain-like 337 676 - -
Mal6g3560 1215 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 376 - -
Mal6g3560 1215 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 380 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3560 Mal-Chr6 104638696 104644902 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3560 52 608 WRKY Transcription Factor Family AT4G12020 30.063 1.13e-65 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3560 - - lja:Lj2g3v0582820.1 1605.11