Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3559 ATGGATGCTTCCTCATCTTCTTTCAACCATGGATATGTTTACCATGTCTTCTTAAGCTTTAGAGGTGAAGATACTCGCGAAAATTTTACCGGCCATCTTTACAATGCTCTTGATCAAAGGGGAATCAACACTTTCATAGATGATGAAGGGTTAAGGATTGGAGAAGAGATTTCACAATCTCTTCTTAAAGCAATAGAAGTGTCAAAGATTTCCATCATCATATTTTCAAAGAACTATGCTAATTCCACTTGGTGCCTTGATGAACTTGTGAAGATTCTTGAATGTAAGAAAGATAAAGGACAAGTGGTTTGCTCAGTCTTTTATAACATTAGTCCTTCAGATGTGAGGCATCAGAGAGGAAGTTATGAAGAAGCTTTTGATATGCTTGAAGAAAGATTTGAAGATAAGAAGGAAAAGGTGAAGAAATGGAGGATGGCTTTGACTGAAGCTGCAAACCTTTCTGGATGGCATTTTAGGAATGGGTACGAATTTAAATTTATCCAAAGCATAGTAGATGAGGTATCAAGAAAGTTGAATCGAATCCCTCTAAATGTCGCGATACACCCTGTCGGACTCCAAGCTCGCGTATCAGATGTTAACTCACTCTTAGAACTTGAATGCAATGATGTTAAAATGATAGGAATTTATGGTATTGGTGGAATTGGTAAAACAACCATTGTTAAAGCTGTGTACAACACAATATATGATCAATTTCGATATGCGAGTTTTCTTGCAAATGTCAGAGAAAATGCAAGTCATAGGGTTGGCTTAGTCAAACTCCAAGAGAGACTTCTGTTTGAGATACTTGGAGAGAAAGGAATGAAATTAGGCAATGTTGATATAGGAATCAATATAATAAAAGATAGGTTATGTAGAAAAAAAGTTCTACTTGTTATTGATAATGTGGATGATGTGGAACAGCTACAAGCATTAGTCGGCGGATTTGATTGGTTTGGTCCTGGAAGTAGGATTATCGTAACTACAAGAGATAAACATTTGTTAACTGCTCATGAAATTGGTTTAACTTATGAGGTGAAGAAGTTAAATCATATTGAATCTCTTCAATTATTTAGCTGGAATGCATTTAAAAGAAGTGAACCTAAAGATACTTATTTGGATATTTCGAATCGAGCTGTTTGTTACGCAGAAGGTCTTCCATTGGCTTTAACTATTTTAGGTTCTGATTTGTGTGGTAGAAGTATTCATCAGTGGGAATCTGCGTTGAATAAATACAAGAGAACTCCTAATAGGAAAGTTCAGGATATACTTAGAATAAGTTTTGATGGTTTAGAGGAAAATGAAAAGGAAATTTTTCTTTATATAGCATGTTTCTTTAAAGGGGAGATAATGGAATATGCTTCGAAAGCGCTGTGTGCTTGCGATCTGCATCCAGTTATCGGTATTGCAGTGCTTGTTGACAAGTCTCTCATAAACTTGGATGAAAAAGGTGTATTGTCAATGCATGATCTTATACAAGATATGGGGAAGGAAATTGTTCGGCAAGAATCGCCAATGGATCCTGGAAAACGCAGCAGGTTGTGGTATTACGAAGATGTTCTTCAAGTACTGACAGATGGAACGGGAAGTGACAAGATTCAAGGTATAATGCTGAGCCTACCTGAAAAGCAAGAGTTGAAGCTAAAAGCTCAAGACCTCAAGAAGATGAGAAACCTTAGAATGTTGATAATTCGGAATGCTGAATTTTCCGGAGGCCATGTTAATCTACCAAATAATTTAAGGCTGCTTGATTGGGAGGAATATCCTTCTTCATTTTTACCATCCGATTTCCTTCCCGAGAAAATTGTAATGCTAGAGTTACGGCGCAGTCATATAACATTGGACAAGCCATTCAAGAACTATGCAAATATGACTTCTCTGAATCTGAGTTCATGCGAATTCCTGATTAGAATACCTGATGTTTCAGGGATACCGAATTTAGAGCAAATTATTCTAGAGGATTGTACAGGCTTAGTTGAGATTCATGAATCACTTGGATCACTTGATAAACTAATTTATTTAGGTGTTGAAAGGTGCACTGAGCTAAAGAAGTTACCAAGTGTTCTGAACTTGCCACTTTTATCATGCATTGCTCTTAATGGATGTTCTCAACTTGAGAATTTCCCAGATTTATATGGAAACATGGAAAATCTGAGAATCATCGAGGTGGAAGAGACGGCTATACAAGAATTGCCTTCAAATATGGTCAATTTCAGCAATCTTGAGGTGTTAGTACTAAAGTGTTGCTCAAATCTTAAGGAATTTCCTAGAACTATTTCTTTGTTGCCAAATCTTGTGTTACTTGATATTTCTGGCTGTCCAAAACTTCAACTATTTCAAGAGTCCGATGAAAGTTCATCAAATTTAGAGTTACCACCAAAACCATGTCTAGATTTTGACTCTTCAGAAATCCAATCCCCACATGGTTTCCCTTTGTTGGAAACCCTTGATCTCAGTGACTGCAAAATTTCAGATGAAGATCTAGGTATCCTATGTTGCTTTTCCAACCTCTCATCCTTAGACATATCAAAAAACCATTTTGTAACCCTACCTCAATGCTTCAACAGACTCAGTAGCTTACATAAGCTTTACATGGCTAATTGCAATAATCTTCAACAAATTTCTGGGATTCCACCTAATTTAGAACATATAGATGCTACTAGTTGCACAATGTTGAATTCACAATCATTGAACCTCTTATTAAGCCAGGTATTCCAAAGGACATTCAAATTTGAAGTTATAGCACCAAAGTCAAGGATACCAATGCCATTCAAGTTCAACTACCATAGCAAAGGAGGATCCATGACATTCTGGCTTGGCCACAAGTTCCCAAGAATTGCCCTATGCTTCATTTTTGAACTAGGAAATAAAAGAATTGGTTTTTTCGCCTGTGAAGTCCAGATATCTATTAATGGTCAGAAAGCATCCAATAGACAACAGTATTTCCTTTCAGTTTCTGGTGATCTTGTATGGCTGTATCATCAAGAAAATTTGATGGATTTAAATACATATTTACTGCATGAACAGAATTATGTCGAAGTTTCTTGTGAAATTATAGATGCGAGTAAAGGCGCAGATGTGACGATATACTTTTGTGGAGTTCATGAGTATAATAAGGAAGATGATGAATTGAAGAAACCAAATTTGATATTGTGCACTAGTTCTAGTCCTTGTAATGATGAATACTTGGATAACACAAAATTTTCTAGGGAAACACATGAAGATAACTTGGGAATTGATTGTTGCACCTTGCCTGAGAGTTTAAGGCTTCATGAAATATCAGATGAACAAATGCAACAGCTTTCAGCTTCGATAAGCTCAGAAATGCTTGAAGTTAATGGTTGTATGGCTCAAAAGAATGAAGATACTATCGCTATTTTGTCAGCTGATACAATACATCAAAGCAAAGAGATGTCTTCATTGAATATGCAACTATATGGTGATCGAATTTGGGATCCAATGCTATTAGAATGCCGATTAAACTGCATGAATGAGAAGAATAAAGACAACATCTTGCCGAGTCATCAAGAGTTGGAGCCAAAAGAATATTTAAGTGATGACAATATGGAGGATTTTTATTCTACCCTCCATGCTGAGACATATGCTTCATTAGGAGAAAGAAGTGATGATTCAAAATTTGCTTATTCTAAACTGAGTGAAGAAACCAAGAAAGCATTGGAAATTCTGAAAGAACTCCTCTCCAGACAAATTTGTCATCTTCTAGAACCAACATCATCAACATCGATGAAAACTACTTTGGAATATCTTTGTACTGTAATTGCAGATGATGATGTCTCAATGAGGTTAAAGTCTGTAATACTACAACTTTTAGCCGACTTTACTCAATGGAGTTGTGACTACAATGATGCAAACATGAAACTTGAGTCATCAATTTTAGTACTATCAAAGCTACAAAAACTTGAAGAGGGTGTAATTTCCAACAAGAACCAGTTCAGTGAATTTGTGTCCATAGAAAGTGAGTTGGGAAGCCAACTAGTTTATTTGGAAGAAAGAATGGAAGAGCTACAAGAACAAATTAGTCTCATTAAAGTGAACATGTCAATATCTGAAGTGGCTAGGGACACTGCTATTAGAAAGAAAAGAGAAACATTTGAAGCAGGAAGAGTGTTGAAAGCTCAAAGAGATGAGTTGAGGAAGCGAAGGCTGCGGTTGAGAGCGGAGCAAGAATCCGCTAAAGCTACCAAAGGATACATTGAGGATGAGTGGTCAAAAATTAGAGAGAAATTTGATAGAATCTTGAAAATCTTTGGGTTAGATTATTAA 4281 0.3628 MDASSSSFNHGYVYHVFLSFRGEDTRENFTGHLYNALDQRGINTFIDDEGLRIGEEISQSLLKAIEVSKISIIIFSKNYANSTWCLDELVKILECKKDKGQVVCSVFYNISPSDVRHQRGSYEEAFDMLEERFEDKKEKVKKWRMALTEAANLSGWHFRNGYEFKFIQSIVDEVSRKLNRIPLNVAIHPVGLQARVSDVNSLLELECNDVKMIGIYGIGGIGKTTIVKAVYNTIYDQFRYASFLANVRENASHRVGLVKLQERLLFEILGEKGMKLGNVDIGINIIKDRLCRKKVLLVIDNVDDVEQLQALVGGFDWFGPGSRIIVTTRDKHLLTAHEIGLTYEVKKLNHIESLQLFSWNAFKRSEPKDTYLDISNRAVCYAEGLPLALTILGSDLCGRSIHQWESALNKYKRTPNRKVQDILRISFDGLEENEKEIFLYIACFFKGEIMEYASKALCACDLHPVIGIAVLVDKSLINLDEKGVLSMHDLIQDMGKEIVRQESPMDPGKRSRLWYYEDVLQVLTDGTGSDKIQGIMLSLPEKQELKLKAQDLKKMRNLRMLIIRNAEFSGGHVNLPNNLRLLDWEEYPSSFLPSDFLPEKIVMLELRRSHITLDKPFKNYANMTSLNLSSCEFLIRIPDVSGIPNLEQIILEDCTGLVEIHESLGSLDKLIYLGVERCTELKKLPSVLNLPLLSCIALNGCSQLENFPDLYGNMENLRIIEVEETAIQELPSNMVNFSNLEVLVLKCCSNLKEFPRTISLLPNLVLLDISGCPKLQLFQESDESSSNLELPPKPCLDFDSSEIQSPHGFPLLETLDLSDCKISDEDLGILCCFSNLSSLDISKNHFVTLPQCFNRLSSLHKLYMANCNNLQQISGIPPNLEHIDATSCTMLNSQSLNLLLSQVFQRTFKFEVIAPKSRIPMPFKFNYHSKGGSMTFWLGHKFPRIALCFIFELGNKRIGFFACEVQISINGQKASNRQQYFLSVSGDLVWLYHQENLMDLNTYLLHEQNYVEVSCEIIDASKGADVTIYFCGVHEYNKEDDELKKPNLILCTSSSPCNDEYLDNTKFSRETHEDNLGIDCCTLPESLRLHEISDEQMQQLSASISSEMLEVNGCMAQKNEDTIAILSADTIHQSKEMSSLNMQLYGDRIWDPMLLECRLNCMNEKNKDNILPSHQELEPKEYLSDDNMEDFYSTLHAETYASLGERSDDSKFAYSKLSEETKKALEILKELLSRQICHLLEPTSSTSMKTTLEYLCTVIADDDVSMRLKSVILQLLADFTQWSCDYNDANMKLESSILVLSKLQKLEEGVISNKNQFSEFVSIESELGSQLVYLEERMEELQEQISLIKVNMSISEVARDTAIRKKRETFEAGRVLKAQRDELRKRRLRLRAEQESAKATKGYIEDEWSKIREKFDRILKIFGLDY* 1427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3559 1426 Coils Coil 1380 1400 - -
Mal6g3559 1426 Gene3D - 9 182 IPR035897 -
Mal6g3559 1426 PRINTS Disease resistance protein signature 212 227 - -
Mal6g3559 1426 PRINTS Disease resistance protein signature 759 775 - -
Mal6g3559 1426 PRINTS Disease resistance protein signature 289 303 - -
Mal6g3559 1426 PRINTS Disease resistance protein signature 382 396 - -
Mal6g3559 1426 SMART till_3 13 153 IPR000157 GO:0007165
Mal6g3559 1426 Pfam NB-ARC domain 202 417 IPR002182 GO:0043531
Mal6g3559 1426 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 974 IPR044974 GO:0006952
Mal6g3559 1426 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1240 1398 IPR044974 GO:0006952
Mal6g3559 1426 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 974 - -
Mal6g3559 1426 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1240 1398 - -
Mal6g3559 1426 Gene3D Ribonuclease Inhibitor 709 905 IPR032675 -
Mal6g3559 1426 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Mal6g3559 1426 Coils Coil 119 139 - -
Mal6g3559 1426 Coils Coil 1324 1351 - -
Mal6g3559 1426 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Mal6g3559 1426 SUPERFAMILY L domain-like 487 901 - -
Mal6g3559 1426 Gene3D Ribonuclease Inhibitor 532 708 IPR032675 -
Mal6g3559 1426 Gene3D - 183 341 IPR027417 -
Mal6g3559 1426 Gene3D - 347 431 IPR042197 -
Mal6g3559 1426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 441 IPR027417 -
Mal6g3559 1426 Pfam TIR domain 14 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3559 Mal-Chr6 104632983 104638394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3559 8 816 WRKY Transcription Factor Family AT4G12020 31.490 5.51e-94 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3559 - - lja:Lj0g3v0340619.1 1886.31