Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3547 ATGGAAGACAACACTCAGGTACATGATAATTCTTCGAAATCTACCCAACAACATGGAAACAAAGCCAAACAAAACCAAAAAGTTCCATTCTACAAGCTTTTTAGTTTTGCTGATCGTCTTGATGTAACTTTGATGATTATTGGCACTATCTCTGCCATGGCTAATGGATTTGCAAGTCCTATCATGACACTTCTTCTTGGGAAAATCATCAATGCTTTTGGCTCCTCTAATCAATCAGAAGTTCTCAATCAAGTTTCTAAGGTATCATTGTTATTTGTTTACCTGGCTATTGGGTCTGGAATAACATCATTTCTACAGGTATCATGTTGGATGGTGACAGGAGAAAGACAATCTGCGAGGATTCGTAGCTTGTACTTGAAAACCATATTAAAGCAGGATATTGCATTCTTTGACACTGAAACTAACACTGGAGAGGTAATTGGTAGAATGTCTGGTGACACAATTCTCATTCAAGAGGCTATGGGAGAAAAGGTTGGGAAGTTTCTTCAACTTGGTTCAAATTTTATTGGTGGTTTTGTGATTGCATTTATAAGAGGATGGCGTCTAGCGGTAGTTTTACTCGCATGCGTACCTTGTATTGTAATTGCTGGTGCTTTCATGTCCATGGTGATGTCTAAAATGGCAATTCGCGGACAAGTTGCTTACGCAGAAGCAGGAAATGTTGTTAATCAAACAGTTGGAGCCATGAGAACAGTTGCATCTTTTACTGGTGAGAAAAAATCCATAGAGAAGTATAATAGCAAGATAAAAATTGCTTATACTGCTGCAGTTCAACAAAGCATAGCCTCAGGGTTAGGAATGGGAATGCTTCTCCTTATTATCTTCTGCTCTTATGGACTTGCCATGTGGTATGGTTCAAAACTAGTGATTACGAAAGGATATAATGGCGGAACGATCATGACTGTGATCATAGCTCTTGTGACTGGTGGAATGTCATTAGGTCAGACATCCCCAAGCTTACATGCATTTGCTGCAGGCCAAGCAGCAGCATATAAAATGTTTGAGACGATTAAAAGAAAGCCGAAAATTGATGCATATGATACTAGTGGTGTTGTGTTGGAAGACATAAAGGGGGATATTGAACTCAGAGATGTTCACTTCAGATACCCTGCAAGGCCAGATGTGGAGATCTTTGCTGGATTCTCATTGTTTGTTCCAAGTGGCACAACTACTGCTTTGGTAGGTCAAAGTGGAAGTGGGAAATCTACTGTAATCAGCTTGTTGGAAAGATTCTATGATCCTAATGCTGGAGAAGTACTTATAGATGGTGTGAATTTGAAGAATTTGCAACTTAGATGGATAAGAGAACAGATTGGACTAGTTAGTCAAGAACCTATCTTGTTTACTACTACTATCAGAGAGAACATAGCATATGGGAAAGAAGGTGCAACTGATGAGGAGATAACAGCAGCTATAACACTTGCTAATGCCAAAAATTTCATTGACAGGCTTCCTCAGGGCCTTGACACAATGGCAGGGCAAAATGGGACTCAACTTTCTGGAGGGCAAAAGCAAAGAATTGCAATTGCAAGAGCAATATTGAAGAATCCAAAAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACATATTGTTCAAGAAGCATTAGAAAAAATTATACTAAAAAGGACTACTGTTGTCGTTGCACATCGTTTGACAACTATCAGAAATGCTGACACAATAGCAGTGGTTCAACAGGGGAAAATCATCGAAAGAGGAACTCATAGCGAGTTAACCATGGATCCTAACAGTGCCTATTCTCAACTTATTCGTCTGCAAGAAGGAGAAAAAGAAGCTGAAGGTAGTGGAAAGTCTGAACCAGATAGGTTAGGTGACATAGATAGTCATATGGCTGGATCTTCGACTCAGAGAAGTTCCTTTAGGAGATCAATAAGCCAAACTTCATCATTGAGTCATCGACATTCCCAGTTGTCTGGAGAATTTGTAGAAGAAAATATTGAACAAGGTCAAGTCGATAACAAGAAAAAACCTAAACAGGTATCTATATGGCGTTTGGCCAAGTTGAACAAGCCGGAACTTCCTGTTGTACTTCTTGGAACCATCGCTGCAATAGTAAATGGTGTCGTGTTCCCTATATTTGGCTTCTTGTTTTCAGCAGTCATTAGTATGTTTTACAAACCTGCAGAACAGCAGAAGAAAGAGTCCAGGTTCTGGTCACTTCTATATGTGGGTTTGGGTTTCGTTACTCTAGTGGTTTTTCCACTAAAGAATTACTTCTTTGGGGTTGCTGGTGGAAAACTTATTGAAAGAATTCGTTCGTTGACATTTGCGAAGATTGTGCACCAAGAAATTAGATGGTTTGATGATCCTGCACATTCAAGTGGTGCAGTTGGTGCAAGGTTATCTATCGACGCTTCAACTGTGAAAGGTATTGTTGGTGACACCTTGGCCCTCATTGTGCAGAACATAACAACGATCGCAGCTGGTCTAGTTATAGCATTCTCTGCTAATTGGATTCTCGCTTTGATAGTTTTGGCTGTATCACCTTTGATTCTTATGCAAGGAATGGTTCAGATGAAGTTTCTTAAAGGTTTCAGTGGTGATGCCAAGGTTATGTATGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTAGTAGCATCAGAACTGTTGCGTCGTTTTGTGCAGAATCAAAGGTGATGGACATGTACAGGAAAAAATGTTTAGGGCCGGAGAAACATGGTGCTCGCTTGGGGCTTGTTAGTGGCGCAGGATTTGGTTTATCTTTTTTAGTTCTATACTGCACAAATGCTTTCATTTTCTACATAGGATCTATTTTAGTGCATCACGGGAAAGCAACGTTTGTAGAAATTTTCAGGGTTTTCTTTAGTCTAACAATGACGGCAATGTCCGTTTCCCAGTCTTCTACATTGGCTCCCGACACTAACAAGGCCAAAGATGCCGCAGCTTCAATATTTGAAATTCTTGACAGCAAACCTGATATTGATTCCAGCAGCAATGACGGTGTAACACAAGAAACGGTAGTTGGCAATATCGAACTTCAACATGTCAACTTTAGTTATCCAACGAGGCCCGACATTCAAATTTTCAAAGATTTAAGCCTAAGCATCCCATCTGCAAAGACTAGATTTTATGACCCTAATTCCGGACGTGTATTACTAGATGGAGTGGATATCAAAACTTTGAGATTAAGCTGGTTGAGACAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGCGCCAACATAGCTTACGGCAAAGAAGGTGGTGCTACGGAGGATGAGATCATAGCAGCAGCGAACGCGGCCAATGCACACAACTTCATAAGTTCACTTCCAAATGGTTATGAGACTTCAGTTGGTGAAAGAGGCACACAACTATCAGGAGGACAGAAGCAGCGCATTGCGATTGCAAGAGCCATGCTGAAAAACCCTAAAATACTTTTGCTTGATGAGGCAACAAGTGCACTTGATGCCGAGTCAGAGCGTATAGTTCAAGAAGCTCTAGATAGAGTGAGTTTGAACAGAACTACTGTGGTCGTGGCTCACCGTCTTACAACAATTCGAGGCGCTGATACTATAGCAGTAATCAAAAATGGGGTGGTTGCTGAAATGGGAAGACATGATGAGTTAATGAACATTACTCATGGTGTTTATGCTTCATTAGTAGCTCTTCATTCAAGTGCATCATGA 3726 0.4058 MEDNTQVHDNSSKSTQQHGNKAKQNQKVPFYKLFSFADRLDVTLMIIGTISAMANGFASPIMTLLLGKIINAFGSSNQSEVLNQVSKVSLLFVYLAIGSGITSFLQVSCWMVTGERQSARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQEAMGEKVGKFLQLGSNFIGGFVIAFIRGWRLAVVLLACVPCIVIAGAFMSMVMSKMAIRGQVAYAEAGNVVNQTVGAMRTVASFTGEKKSIEKYNSKIKIAYTAAVQQSIASGLGMGMLLLIIFCSYGLAMWYGSKLVITKGYNGGTIMTVIIALVTGGMSLGQTSPSLHAFAAGQAAAYKMFETIKRKPKIDAYDTSGVVLEDIKGDIELRDVHFRYPARPDVEIFAGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPNAGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTTIRENIAYGKEGATDEEITAAITLANAKNFIDRLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESEHIVQEALEKIILKRTTVVVAHRLTTIRNADTIAVVQQGKIIERGTHSELTMDPNSAYSQLIRLQEGEKEAEGSGKSEPDRLGDIDSHMAGSSTQRSSFRRSISQTSSLSHRHSQLSGEFVEENIEQGQVDNKKKPKQVSIWRLAKLNKPELPVVLLGTIAAIVNGVVFPIFGFLFSAVISMFYKPAEQQKKESRFWSLLYVGLGFVTLVVFPLKNYFFGVAGGKLIERIRSLTFAKIVHQEIRWFDDPAHSSGAVGARLSIDASTVKGIVGDTLALIVQNITTIAAGLVIAFSANWILALIVLAVSPLILMQGMVQMKFLKGFSGDAKVMYEEASQVANDAVSSIRTVASFCAESKVMDMYRKKCLGPEKHGARLGLVSGAGFGLSFLVLYCTNAFIFYIGSILVHHGKATFVEIFRVFFSLTMTAMSVSQSSTLAPDTNKAKDAAASIFEILDSKPDIDSSSNDGVTQETVVGNIELQHVNFSYPTRPDIQIFKDLSLSIPSAKTRFYDPNSGRVLLDGVDIKTLRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGGATEDEIIAAANAANAHNFISSLPNGYETSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSLNRTTVVVAHRLTTIRGADTIAVIKNGVVAEMGRHDELMNITHGVYASLVALHSSAS* 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3547 1241 ProSitePatterns ABC transporters family signature. 506 520 IPR017871 GO:0005524
Mal6g3547 1241 CDD ABC_MTABC3_MDL1_MDL2 1017 1234 - -
Mal6g3547 1241 MobiDBLite consensus disorder prediction 606 655 - -
Mal6g3547 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 605 IPR027417 -
Mal6g3547 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1235 IPR027417 -
Mal6g3547 1241 MobiDBLite consensus disorder prediction 606 625 - -
Mal6g3547 1241 SUPERFAMILY ABC transporter transmembrane region 32 351 IPR036640 GO:0005524|GO:0016021
Mal6g3547 1241 SMART AAA_5 912 1212 IPR003593 -
Mal6g3547 1241 SMART AAA_5 394 580 IPR003593 -
Mal6g3547 1241 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1017 1235 IPR003439 GO:0005524
Mal6g3547 1241 CDD ABC_6TM_Pgp_ABCB1_D1_like 45 327 - -
Mal6g3547 1241 MobiDBLite consensus disorder prediction 628 655 - -
Mal6g3547 1241 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 46 332 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g3547 1241 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 367 603 IPR003439 GO:0005524
Mal6g3547 1241 MobiDBLite consensus disorder prediction 8 24 - -
Mal6g3547 1241 Pfam ABC transporter transmembrane region 695 968 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g3547 1241 Pfam ABC transporter transmembrane region 45 317 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g3547 1241 Gene3D ABC transporter type 1, transmembrane domain 984 1006 IPR036640 GO:0005524|GO:0016021
Mal6g3547 1241 Gene3D ABC transporter type 1, transmembrane domain 675 983 IPR036640 GO:0005524|GO:0016021
Mal6g3547 1241 Gene3D - 1007 1238 IPR027417 -
Mal6g3547 1241 Gene3D - 357 606 IPR027417 -
Mal6g3547 1241 Gene3D - 662 674 IPR027417 -
Mal6g3547 1241 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 22 1238 IPR039421 -
Mal6g3547 1241 CDD ABC_6TM_Pgp_ABCB1_D2_like 685 1000 - -
Mal6g3547 1241 MobiDBLite consensus disorder prediction 1 24 - -
Mal6g3547 1241 CDD ABC_MTABC3_MDL1_MDL2 367 605 - -
Mal6g3547 1241 ProSitePatterns ABC transporters family signature. 1138 1152 IPR017871 GO:0005524
Mal6g3547 1241 SUPERFAMILY ABC transporter transmembrane region 675 999 IPR036640 GO:0005524|GO:0016021
Mal6g3547 1241 Pfam ABC transporter 388 534 IPR003439 GO:0005524
Mal6g3547 1241 Pfam ABC transporter 1047 1166 IPR003439 GO:0005524
Mal6g3547 1241 Gene3D ABC transporter type 1, transmembrane domain 32 612 IPR036640 GO:0005524|GO:0016021
Mal6g3547 1241 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 696 982 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g3547 1241 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 22 1238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3547 Mal-Chr6 104411962 104417562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3547 21 1237 Calmodulin-binding Proteins AT2G36910 43.402 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3547 K05658 - gmx:100801771 1834.69