Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3521 ATGGGGAAAAAATACGAAGGATGTGCTGTGGGAATTGACCTTGGAACAACGTATTCGTGTGTTGCTGTGTGGCTTGATGAACACAATAGAGTTGAGATTATTCACAATGATCAAGGAAACAAAACCACACCTTCTTTTGTTGCTTTCACCGATGATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAGGCTGCCACCAACCCTGAAAACACTGTTTTTGATGCTAAGAGGTTGATTGGCAGGAAGTTTAGTGATTCCGTTGTTCAAAACGATACAATGTTGTGGCCATTCAAGGTCATTGTCGGTGTCAATGACAAACCCATGATTTCTGTTAAGTACAAGGATCAGGAGAAGCACCTATGTGCTGAGGAAATCTCGTCTATGGTTCTCTCAAAGATGCGCGAGATTGCGGAGACATTTTTGGAATTGCCTGTCAAGAATGCAGTTGTTACTGTGCCTGCTTATTTCAATGATTCTCAGCGGAAAGCCACCATAGATGCTGGTGCCATTGCTGGACTTAATGTTATGCGGATAATCAATGAGCCCACTGCAGCAGCTATTGCATATGGCCTTGACAATAGAACTAACTGTGCGGGAGAAAGAAATACTTTCATCTTTGACCTGGGTGGTGGGACTTTTGATGTGTCTCTCCTTACAATTAAGGATAAAGTCTTCCAGGTTAAGGCCACCGCTGGAAACACTCATCTCGGGGGAGAGGACTTTGATAATAGGATGGTGAACTACTTTGCACAAGAGTTTAAGAAGAAGCACAAGGTGGATATTACTGAGAACTCAAGAGCCTTAAGGTGGTTAAGAACAGCTTGCGAGAGAGCAAAAAGGACACTATCTTTTGCTGTTGTCACGACCATTGAGGTAGATTCTTTATTTCAAGGCATTGACTTCTTTTCATCAATAACTCGTGCCAAGTTTGAGGAAATCAATATGGATCTTTTCAATGAGTGTTTGGAAACTGTTGAGTGTTGTCTTATTGATGCTAAGATGGACAAGAGCGCTATACATGATGTTGTCCTAGTTGGTGGCTCCTCGAGAATTCCAAAAGTACAACAGCTATTGCAGGAATTTTTTAAAGGGAAGGATTTGTGCAAGAGCATCAATCCTGATGAGGCTGTTGCTTACTGCTTTAAACACCAGCATTCCTATAAAAAAACAAAAGGTTATTCAACATCAATTGATAACCAAGCTGTTGCTGCCATTAATGTTTATGAAGGTGAGAGATCAAGAGCTAGTGACAACAATCTGATTGGTTTCTTTTGTCTTTCTGGCCTCCCATATGCTCCTCGCGGCCACCCTTTTGAGGTATGCTTTGCTATCGATGAAAATGGTATCCTAATCGTTTCTGCTAATGAAAAATCCACTGGTAGTAAGAATGAGATTACAATAACTAATGACAAAGAAAGGTTGTCATCCAAAGAAATTAAAGAAATGATCAGAGAAGCTGAAAATTACCGTGTTGAAGATGAAAAATTTCTAAGGAAGGCCAATGTAATGAATGCATTAGATTACTGTGTTTACAAGATGAAGAATGCTTTAAAGAAGAAGGATATTAATCTGAAGCTCTCCTCTCAAGAAAATGACAAGATCAATTTCGCAATTACAAAGGCCACAAATTTGCTTGAAAGTAACCAGCAGAGTGAAATAGATGTTCTTGAGAATCATCTGAAGGAGCTTGAGAGTATGTTCCAGCTTATCATCGGCAAATCTGTCTAG 1728 0.401 MGKKYEGCAVGIDLGTTYSCVAVWLDEHNRVEIIHNDQGNKTTPSFVAFTDDQRLIGDAAKNQAATNPENTVFDAKRLIGRKFSDSVVQNDTMLWPFKVIVGVNDKPMISVKYKDQEKHLCAEEISSMVLSKMREIAETFLELPVKNAVVTVPAYFNDSQRKATIDAGAIAGLNVMRIINEPTAAAIAYGLDNRTNCAGERNTFIFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDFDNRMVNYFAQEFKKKHKVDITENSRALRWLRTACERAKRTLSFAVVTTIEVDSLFQGIDFFSSITRAKFEEINMDLFNECLETVECCLIDAKMDKSAIHDVVLVGGSSRIPKVQQLLQEFFKGKDLCKSINPDEAVAYCFKHQHSYKKTKGYSTSIDNQAVAAINVYEGERSRASDNNLIGFFCLSGLPYAPRGHPFEVCFAIDENGILIVSANEKSTGSKNEITITNDKERLSSKEIKEMIREAENYRVEDEKFLRKANVMNALDYCVYKMKNALKKKDINLKLSSQENDKINFAITKATNLLESNQQSEIDVLENHLKELESMFQLIIGKSV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3521 575 SUPERFAMILY Actin-like ATPase domain 8 192 IPR043129 -
Mal6g3521 575 Gene3D - 194 368 - -
Mal6g3521 575 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Mal6g3521 575 PRINTS 70kDa heat shock protein signature 371 391 - -
Mal6g3521 575 PRINTS 70kDa heat shock protein signature 339 355 - -
Mal6g3521 575 PRINTS 70kDa heat shock protein signature 60 68 - -
Mal6g3521 575 PRINTS 70kDa heat shock protein signature 38 50 - -
Mal6g3521 575 PRINTS 70kDa heat shock protein signature 211 221 - -
Mal6g3521 575 PRINTS 70kDa heat shock protein signature 148 168 - -
Mal6g3521 575 PRINTS 70kDa heat shock protein signature 8 21 - -
Mal6g3521 575 PANTHER HEAT SHOCK 70 KDA PROTEIN 388 573 - -
Mal6g3521 575 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 380 - -
Mal6g3521 575 PANTHER HEAT SHOCK PROTEIN 70KDA 388 573 IPR013126 GO:0005524|GO:0140662
Mal6g3521 575 PANTHER HEAT SHOCK PROTEIN 70KDA 4 380 IPR013126 GO:0005524|GO:0140662
Mal6g3521 575 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Mal6g3521 575 Gene3D - 73 128 - -
Mal6g3521 575 Gene3D Actin; Chain A, domain 4 237 320 - -
Mal6g3521 575 Coils Coil 546 566 - -
Mal6g3521 575 Gene3D - 10 379 - -
Mal6g3521 575 SUPERFAMILY Actin-like ATPase domain 199 379 IPR043129 -
Mal6g3521 575 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 387 506 IPR029047 -
Mal6g3521 575 Gene3D - 504 575 IPR029048 -
Mal6g3521 575 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 503 573 IPR029048 -
Mal6g3521 575 Pfam Hsp70 protein 386 571 IPR013126 GO:0005524|GO:0140662
Mal6g3521 575 Pfam Hsp70 protein 9 379 IPR013126 GO:0005524|GO:0140662
Mal6g3521 575 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 383 503 IPR029047 -
Mal6g3521 575 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3521 Mal-Chr6 103780399 103785876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3521 1 573 Calmodulin-binding Proteins AT3G12580 62.075 0.0 758