Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3515 ATGGTTAGGAAGAGGAGAACGGATGGACCTGGTGGTGCAGAGAGCTCTGATGGTCAACAGAGAACTTCGCCACCTCAACAACAAGCTGCTGTAACTGGGGGTGCTGGATACCAAGGAGGTGGAGGGCCTCAAGGAGGTCGCGGCTATGCTCCACAAGGTGGTCGTGGGGATTATGGTGGTGGTCGTGGGGATTATGGTGGTGGTCGTGGGGATTATGGTGGTGGACGTGGTGACTATGGTGGTGGTTGTGGTGGTTATGGAGGTGGTGCACGTGGTGGCCGAGGGATGCCGCAACAGCAATATGGTGGAAGGGTAGGACCTCCTCAACAACAGCAGTATGGTGGCCCACCACCTGAGTATCAAGGAGGCAGAGGAGGTAGGGGTGCTCCTTCTCAGCAAGGAGGCCGTGGGTATGGTGGCCGAGGTGGATATGGTGGTGGTGGTGGTGCTGGCGGTGGCCAAGATGTTGTTCCTTCGTATGGCGGCCCACCAAGGCAACCCATCCCCGAGCTGCACCAAGCAACATCAGTACCTTCTGCTCCATATCAAGCTCCCGTGTCTCCACCAACTGCACCCCTGTCCGAAGTAGGCTCCTCATCTCAGCCACCTGAAGTGACTGAAGTGGAACAGAATTTAGGTCAAATGACCATCCATTCTGATGAGACTCCTGCTCCTCCTCCTCCTCAAAGTAAATCCTCACTGAGGTTTCCCCTACGCCCTGGCAAAGGAACCTCTGGTAGGAAATGTCTTGTGAAGGCAAACCATTTCTTTGCTGAGTTGCCTAAAAAAGACCTGCATCAATATGATGTTACCATTACTCCAGAGGTGACTTCGAGGGGTGTCAACCGTGCTGTTATGGAACAGCTTGTAAGGCTGTACCGTGACTCGCACCTTGGAAAGAGGCTTCCTGCTTACGATGGTCGTAAGAGTCTCTATACTGCTGGACCGCTTCCTTTTATTTCAAAGGACTTTAGAATCACCCTTGTTGATGAAGATGATGGATCTGGAGCGCAGAGGAGGGACAGGGAGTTCAAAGTTGTGATTAAATTGGCTGCACGTGCTGACCTTCACCATCTGGGACTCTTTTTGGAGGGGAGGCAAACTGATGCACCTCAGGAAGCTCTGCAGGTTCTTGACATTGTTCTCCGGGAGCTTCCTACTACAAGGTATTGTCCAGTTGGAAGATCCTTTTACTCCCCTGATCTGGGTAGAAGGCAGCCTTTAGGTGAGGGATTGGAAAGTTGGCGTGGGTTCTACCAGAGCATTCGTCCTACTCAAATGGGACTGTCTTTGAACATTGATATGTCTTCAACTGCTTTTATCGAGCCATTGCCTGTCATTGACTTTGTTACACAGTTGCTGAACAGGGATGTCTCGGCCAGACCTCTGTCTGATGCTGATAGAGTAAAGATCAAAAAGGCACTTCGAGGTATTAAAGTTGAAGTTACACATCGTGGCAACATGAGGAGAAAGTACCGCATCTCTGGTCTGACTTCACAAGCTACCAGAGAGTTGACGTTCCCTGTGGATGAGAGGGGAACAATGAAGTCTGTTGTTGAGTATTTCTCTGAGACATATGGTTTTAACATTCAACATACTCAGTGGCCATGTTTGCAAGTGGGCAACACACAGAGACCAAATTACCTTCCAATGGAGGTCTGCAAGATTGTGGAGGGCCAAAGATATTCAAAAAGGCTAAATGAGCGGCAGATTACTGCTCTGCTCAAAGTAACTTGCCAGCGACCTCTTGATAGGGAAAGGGATATTATGCAGACGGTACATCACAATGCTTACCATGAGGATCCTTATGCTAAAGAGTTTGGAATCAAAATAAGTGAGAAACTTGCTCAAGTCGAAGCTCGCATCCTTCCTGCACCTTGGCTAAAATACCATGACACTGGTAGAGAAAGGGATTGTCTACCCCAAGTTGGCCAGTGGAATATGATGAACAAGAAAATGGTCAATGGGGGAAAAGTTCACAACTGGTTCTGCGTCAACTTTTCAAGGAATGTGCAAGACAGTGTTGCGCGTGGCTTTTGCTACGAACTTGCCCAGATGTGTTATATATCTGGCATGGAATTTAATCCAGAGCCAGTGGTTCCTCCACTTAGTGCTCGTCCTGACCAAGTAGAAAAGGTTCTCAAGACAAGATTTCACGATGCAAAAACAAAGTTGCAAGGAAAGGATATTGAACTGCTCATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGATCTGAAGAGAATATGTGAAACTGACTTGGGGGTTGTTTCCCAATGCTGTTTAACTAAACATGTGTTTAAGATGAGCAAGCAGTACCTTGCAAATGTTTCTTTAAAAATCAATGTTAAGGTTGGTGGTAGGAATACTGTGCTTGTCGATGCCCTTTCACGACGCATTCCACTAGTTAGTGACAGGCCTACAATTATTTTCGGAGCTGATGTGACTCATCCACACCCTGGAGAGGATTCTAGTCCATCCATAGCAGCTGTTGTTGCTTCTCAAGATTGGCCTGAGATTACCAAGTATGCTGGTTTGGTGTGTGCCCAAGCACATCGGCAAGAGCTCATCCAAGACCTTTTCAAACAATGGCAAGATCCAGTCAGAGGAACATTGACTGGTGGAATGATCAAGGAGCTTCTTATATCATTCCGGAGAGCTACTGGACAAAAGCCCCAGCGCATCATCTTTTACAGAGATGGAGTTAGTGAGGGACAATTTTACCAAGTTCTGTTGTTTGAGCTTGATGCTATCCGGAAGGCCTGTGCTTCCCTTGAACCCAACTATCAGCCTCCAGTGACCTTTGTGGTGGTGCAGAAACGTCATCATACTAGGCTCTTCGCCAGTAACCACCATGACAAGAGTTCTGTTGATCGTAGTGGCAATATATTGCCTGGCACCGTTGTGGATTCTAAGATTTGTCATCCGACTGAATTTGACTTTTACCTTTGCAGTCATGCCGGAATTCAGGGTACAAGTCGTCCAGCACATTACCATGTGTTATGGGATGAAAATAATTTTACTGCAGATGCTCTACAAAGTCTAACTAACAACCTGTGCTACACATACGCCAGATGCACCCGTTCTGTTTCTATTGTGCCCCCAGCCTATTATGCACATTTGGCTGCATTTAGGGCAAGGTTCTACATGGAACCTGAGACTTCAGATAGTGGCTCAATGACAAGTGGTGCTGTTTCTCGTGGTGGAATGGGAGCTGCAGCAGGACGTAGCACCCGTGCACCTGGAGCTAATGCTGCTGTGAGACCTTTGCCTGCACTGAAGGAAAATGTGAAGAGGGTGATGTTCTACTGCTAA 3321 0.477 MVRKRRTDGPGGAESSDGQQRTSPPQQQAAVTGGAGYQGGGGPQGGRGYAPQGGRGDYGGGRGDYGGGRGDYGGGRGDYGGGCGGYGGGARGGRGMPQQQYGGRVGPPQQQQYGGPPPEYQGGRGGRGAPSQQGGRGYGGRGGYGGGGGAGGGQDVVPSYGGPPRQPIPELHQATSVPSAPYQAPVSPPTAPLSEVGSSSQPPEVTEVEQNLGQMTIHSDETPAPPPPQSKSSLRFPLRPGKGTSGRKCLVKANHFFAELPKKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRDSHLGKRLPAYDGRKSLYTAGPLPFISKDFRITLVDEDDGSGAQRRDREFKVVIKLAARADLHHLGLFLEGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSARPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFSETYGFNIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPLDRERDIMQTVHHNAYHEDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGRERDCLPQVGQWNMMNKKMVNGGKVHNWFCVNFSRNVQDSVARGFCYELAQMCYISGMEFNPEPVVPPLSARPDQVEKVLKTRFHDAKTKLQGKDIELLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMSKQYLANVSLKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTLTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVSRGGMGAAAGRSTRAPGANAAVRPLPALKENVKRVMFYC* 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3515 1106 Pfam Piwi domain 733 1052 IPR003165 GO:0003676
Mal6g3515 1106 Gene3D - 801 1106 IPR036397 GO:0003676
Mal6g3515 1106 CDD Piwi_ago-like 602 1052 IPR045246 -
Mal6g3515 1106 PANTHER PROTEIN ARGONAUTE 1A 130 1105 - -
Mal6g3515 1106 Pfam Argonaute linker 1 domain 392 442 IPR014811 -
Mal6g3515 1106 SMART DUF1785_2 391 443 IPR014811 -
Mal6g3515 1106 Gene3D paz domain 437 562 - -
Mal6g3515 1106 Pfam N-terminal domain of argonaute 247 382 IPR032474 -
Mal6g3515 1106 Pfam PAZ domain 448 573 IPR003100 GO:0005515
Mal6g3515 1106 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 130 1105 - -
Mal6g3515 1106 SMART Piwi_a_2 732 1053 IPR003165 GO:0003676
Mal6g3515 1106 ProSiteProfiles PAZ domain profile. 444 558 IPR003100 GO:0005515
Mal6g3515 1106 SUPERFAMILY Ribonuclease H-like 721 1053 IPR012337 -
Mal6g3515 1106 CDD PAZ_argonaute_like 443 557 - -
Mal6g3515 1106 ProSiteProfiles Piwi domain profile. 732 1053 IPR003165 GO:0003676
Mal6g3515 1106 MobiDBLite consensus disorder prediction 13 33 - -
Mal6g3515 1106 MobiDBLite consensus disorder prediction 1 245 - -
Mal6g3515 1106 SUPERFAMILY PAZ domain 250 595 IPR036085 GO:0005515
Mal6g3515 1106 Pfam Argonaute linker 2 domain 584 630 IPR032472 -
Mal6g3515 1106 MobiDBLite consensus disorder prediction 192 218 - -
Mal6g3515 1106 SMART PAZ_2_a_3 448 580 IPR003100 GO:0005515
Mal6g3515 1106 Pfam Mid domain of argonaute 641 715 IPR032473 -
Mal6g3515 1106 Gene3D - 622 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3515 Mal-Chr6 103631019 103638779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3515 165 1106 Eukaryotic Initiation Factors Gene Family AT1G48410 82.632 0.0 1621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3515 K11593 - gmx:100780375 1769.59