Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3514 ATGTCACCAGTTGGATTACCACCAGGTTTCAGGTTCCATCCAACTGATGAAGAACTTGTTAATTATTATCTAAAGAGGAAAATCAATGGTCAAGAAATTGAACTTGATATCATTCCTGAAGTTGATCTTTACAAATGTGAACCTTGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGATCCAGAGTGGTACTTTTTCGGACCGCGGGATCGGAAATACCCTAATGGATTCAGAACAAATAGAGCAACAAGAGCAGGATATTGGAAATCTACTGGAAAAGATAGAAAAGTTTCAAGCCAAAGTAGACCTATTGGTATGAAGAAGACTTTGGTTTACTATAGAGGAAGAGCTCCTCAAGGAATTAGAACTGATTGGGTTATGCATGAGTATCGTCTTGATGATAAAGAGTGTGAGGATAACACTGGATTACAGGATACGTATGCATTGTGTCGCGTGTTCAAGAAAAATGGAATCTGTTCTGATATGGAAGAGCAACAAGGACAATGTAGCATGTCACTAATTGAATGTTCCCAAACCATAATCAATGAGTGTGAAATGATGTCTCCAGAAATACTAGGAGCTTCATCTTCATGCTTAGAAGAGGAAGACAAAGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTATTCTTCTAATACATCAATGGTTGGTGGTGATGAAGTTTCACATGTTACATTTACAAATTAA 717 0.3724 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVSSQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDNTGLQDTYALCRVFKKNGICSDMEEQQGQCSMSLIECSQTIINECEMMSPEILGASSSCLEEEDKDDSWMQFITEDAWYSSNTSMVGGDEVSHVTFTN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3514 238 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Mal6g3514 238 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 238 - -
Mal6g3514 238 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Mal6g3514 238 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Mal6g3514 238 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mal6g3514 238 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3514 Mal-Chr6 103545804 103550552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3514 1 227 NAC Transcription Factor Family AT3G17730 76.349 4.48e-133 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal6g3514 NAM 5.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3514 - - gmx:100784495 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3514 6 103545804 103550552 Mal6g3514 6 103545804 103550552 ECH