Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3510 ATGGAGTATCATAGTGGAGCAAGTGGGTCCCCTGGTGATCATCATCATCACCATGGTGGTTCTTCTGATTCTCAGAGAAGAAAGAAACGTTACCACCGTCACACTGCTAATCAGATTCAAAGGCTTGAAGCTATGTTCAAGGAGTGTCCACATCCTGATGAGAAACAAAGGTTGCAATTAAGCAGAGAATTAGCTTTGGCTCCTAGACAAATCAAATTTTGGTTTCAGAACAGAAGAACTCAGATGAAGGCACAGCATGAAAGAGCTGATAATTGTCAACTAAGGGCAGAGAATGATAAGATAAGATGTGAGAATATAGCTATAAGGGAAGCCCTTAGAAATGTGATGTGCCCCAATTGTGGTGGTCCTCCAAACAATGATGATTGTTACTTTGATGAACAAAAGCTGAGAATTGAAAATGTTCAACTCAAAGAAGAGCTTGATAGAGTATCAAGCATTGCTGCTAAATACATTGGAAGACCAATTTCACAGCTTCCACCAATTGCACCAATTCACATATCATCATTGGACTTATCAATGGGAAACTTTGGTGCACAAGGAATGGTTGGAGGACCTTCACTTGATCTTGATCTTCTACCAGGAAGTTCATCAGCTATGCAAAATGTTCCTTACCAACCAGCTTGTCTTTCTGACATGGAAAAATCACTCATGTCTGACATTGCAACAAATGCAATGGAAGAGATGGTTAGGCTCTTGCAGACTAATGAGCCTATATGGATGAAATCGAACACCGATGGTAAAGATGTTCTTAATCTTGAAACTTATGAGAGGATGTACCCTAAGACTAATCGGTTGAAGAATCCGAATATTCGCATTGAAGCTTCAAGGCATTCTGGTGTTGTTATCTTGAATAGCTCAAATTTGGTTGAAATGTTTATGGATCCAAACAAGTGGATGGAGCTATTTCCAACTATTGTGACCATGGCAAGGACTATTGAAGTTATATCTTCTGGAATGATGGGTGGACATAGTGGTTCTTTGCAATTGATGTATGAAGAGTTGCAAGTGCTTTCACCACTTGTTCCTATTAGAGAATTCTACTTCCTGCGTTACTGTACTCAAATTGAGCAAGGTTTATGGGCAATTGTTGATGTTTCATATGATTTTCCTCATGACAACCAATTTGCTCCGCATTTTCGATGCCATCGTCTTCCTTCTGGTTGCTTCATTCAAGACATGCCTAATGGCTATTCCAAGGTTACTTGGATTGAACATTTGGAGATTGAAGACAAAAATCCAGTTCATAGGCTTTATAGAAATGTTATCTACAGTGGTGCTGCATTTGGAGCTGAAAGATGGCTCACTACACTTCAAAGGATGTGTGAAAGACTTGCTTGTCTTATCGCCAGTTCTCCTCGCGATCTCGGAGGATCGATTCCGTCACCGGAGGGAAAGAAGAGCATGATGAAGCTAGCACAAAGGATGGTAACAAATTTCTGTGCAAGCATAAGTGCATCAGCAAGTCATAGATGGACCACACTTTCAGCTTTGAATGATATTGGAGTCAGAGTTACTGTTAGGAAGAGTACAGATCCTGGTCAGCCTAATGGTGTTGTGCTATGTGCAGCTACTACCATTTGGTTACCTCTCCCTCCACAAACTGTTTTCAATTTCTTCAAAGATGAAAGGAAAAGATCTCAGTGGGATGTCCTTTCCAATGGTAATGCTGTTCAAGAAGTTGCTCATATAGCAAATGGTTCACACCCTGGTAACTGCATTTCTGTGCTTAGGGCTTTCAACACAAGTCAAAACAACATGTTGATACTTCAAGAAAGCTGTGTGGATTCATCAGGTTCACTAGTGGTGTATTGTCCAGTTGATTTACCATCTATGAACATAGCAATGAGTGGTGAAGATCCTTCCTACATTCCATTACTACCCTCAGGTTTCACAATTACTTCTGATGGAAACCAAAATGATAACAATAATAATATTCAAGGAAGTGGTAATAATTTTAATAGTGATGGTGCATCAACAAGCTCAAACACAAACCTAGGAAATAATGGTGGTAGTGGAGGATCTTTAATAACAGTTGCATTTCAAATTATGGTGAGTAGTTTACCATCTGCAAAACTTAACATGGAGTCTGTTGCAACTGTTAATGGACTTATTGGTGAGACTGTTCAGCACATAAAAGCTGCTTTGAATTGTCCTAGTTCTTGA 2184 0.3974 MEYHSGASGSPGDHHHHHGGSSDSQRRKKRYHRHTANQIQRLEAMFKECPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQHERADNCQLRAENDKIRCENIAIREALRNVMCPNCGGPPNNDDCYFDEQKLRIENVQLKEELDRVSSIAAKYIGRPISQLPPIAPIHISSLDLSMGNFGAQGMVGGPSLDLDLLPGSSSAMQNVPYQPACLSDMEKSLMSDIATNAMEEMVRLLQTNEPIWMKSNTDGKDVLNLETYERMYPKTNRLKNPNIRIEASRHSGVVILNSSNLVEMFMDPNKWMELFPTIVTMARTIEVISSGMMGGHSGSLQLMYEELQVLSPLVPIREFYFLRYCTQIEQGLWAIVDVSYDFPHDNQFAPHFRCHRLPSGCFIQDMPNGYSKVTWIEHLEIEDKNPVHRLYRNVIYSGAAFGAERWLTTLQRMCERLACLIASSPRDLGGSIPSPEGKKSMMKLAQRMVTNFCASISASASHRWTTLSALNDIGVRVTVRKSTDPGQPNGVVLCAATTIWLPLPPQTVFNFFKDERKRSQWDVLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCVDSSGSLVVYCPVDLPSMNIAMSGEDPSYIPLLPSGFTITSDGNQNDNNNNIQGSGNNFNSDGASTSSNTNLGNNGGSGGSLITVAFQIMVSSLPSAKLNMESVATVNGLIGETVQHIKAALNCPSS* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3510 727 MobiDBLite consensus disorder prediction 1 35 - -
Mal6g3510 727 ProSiteProfiles 'Homeobox' domain profile. 25 85 IPR001356 GO:0003677
Mal6g3510 727 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 7 725 - -
Mal6g3510 727 MobiDBLite consensus disorder prediction 21 35 - -
Mal6g3510 727 CDD START_ArGLABRA2_like 221 449 - -
Mal6g3510 727 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 7 725 IPR042160 -
Mal6g3510 727 MobiDBLite consensus disorder prediction 640 673 - -
Mal6g3510 727 Pfam Homeodomain 28 83 IPR001356 GO:0003677
Mal6g3510 727 Gene3D - 224 450 IPR023393 -
Mal6g3510 727 SUPERFAMILY Homeodomain-like 4 85 IPR009057 -
Mal6g3510 727 SUPERFAMILY Bet v1-like 218 451 - -
Mal6g3510 727 Gene3D - 13 101 - -
Mal6g3510 727 ProSitePatterns 'Homeobox' domain signature. 60 83 IPR017970 GO:0000981|GO:0006355
Mal6g3510 727 ProSiteProfiles START domain profile. 217 453 IPR002913 GO:0008289
Mal6g3510 727 SMART HOX_1 26 89 IPR001356 GO:0003677
Mal6g3510 727 Pfam START domain 227 450 IPR002913 GO:0008289
Mal6g3510 727 SUPERFAMILY Bet v1-like 469 717 - -
Mal6g3510 727 SMART START_1 226 450 IPR002913 GO:0008289
Mal6g3510 727 CDD homeodomain 27 86 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3510 Mal-Chr6 103432754 103437110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3510 23 727 Homeobox Transcription Factor Family AT1G73360 65.315 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal6g3510 START 4.4e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3510 K09338 - gmx:100809075 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3510 6 103432754 103437110 Mal6g3510 6 103432754 103437110 ECH