Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3506 ATGGAGTCACAGAAGACACAAACTAGTCTAAAAAATGGACATGCTGGTGAACTCTGTAATGTAGTTGTGATAGGAAACAAAGAAGAGAATTTCAAGAAAGAAAAAGTTTCTCCTTTCAATGTCAAAGGTGAAAAACAGCGGAATAGTAACCATGATGGAGAAAATGAATATTTAGAGAGATCTGGGCCATTAGGAATGTGTGATGATCCTTATTGTACTACTTGTCCTACTTACTTCAAGGCTTCTCAACAAAGAAATCCAAAATATTCAAATGAATTTGATCCCAAGTTCCAAAATGCACTTTATGGAGATGCCAAGGGTTTTGGGAGAAATTTTCTCTCTTTCTGTTCTTCATGTGTTCCTGGAGTTATAAATCCTCACACTAAACTTGTTCAACAATGGAACAAATTTCTGGCCATTTTTTGCATGGTGGCAATTTTTGTGGATCCATTATTTTTATTCTTGATATATGTGCAGAAGGACTTTAATTGTATTGCTATGGATTGGAAATTGACAGAAACACTTGTTTTACTTAGAAGCATGAATGATTCTGTATATTTCTTAAACATTCTTCTTCAGTTTAGGTTGGCCTATGTTTCACCAGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGATGATCCCAAGAAAATTGCAGTCCGTTACCTGCAGAGTTATTTTCTTCTTGACTTATTTGTTGTCTTGCCACTTCCTCAAATAATGATACTAACTGTGTTACCCAGGCACTTGGGTTTATCAGGAGCAAATTATGCTAAGAATCTTCTACGTGCAGTGATTCTTGTGCAATATATTCCAAGATTATTTAGGATTTTGTCTCTGCTAAATGGACGGTCTCCAACTGGATTCATATTTGAGTCAGCAAGGGCAAATTTCATCATAAATCTTCTCATGTTTATGCTTGCTAGCCATGTTGTTGGATCTTCCTGGTACCTCTTTGGTCTACAGAGGGTAAATCAATGTTTGAGAGATGCTTGCAATAAGTCTAACATCAAAGGTTGCATTGATGTCATTGACTGTGGACATGGTCGTAATAGAACTAAGCAGTCACCGGACCAAACATCAGTTATGTGGAACAACAATTCCGATGCCATTGCTTGTTTGAATCCTTCTCCGAATGGTTTTCGTTATGGAATCTATGTCACTGCTGTACCGCTTACCTTTGAAACTAACGTGGTCAACAAATATGTGTATTCTCATTTTTGGGGATTACAGCAAATCAGTACTCTGGCTGGTGGTCTAACACCAAGCTATTTTGTGTGGGAAGTCGTCTTTACAATTGCCATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGAAACATACAGAACTTTCTCCAAGGTCTTGGAAGAAGGAGGCTAGAAATGCTACTTAGAGGCCGTGATGTTGAGCAGTGGATGAGGCATCGTCGCTTACCAGAAGATCTCAAAAGGAGAGTACAACAGGCTGAGCGGTATAATTGGGCGGCAACAAGAGGAGTGAACGAAGAAACGCTTCTTGAGAATTTGCCAGAAGATCTTCAAATTGACATAAGGCGTCATCTCTTCAATTTTATCAAGAAAATTAGAATTTTCTCCTTGATGGATGAGCCTATTTTAGATGCAATTTGTGAGAGACTAAGACAGAAGACATACATAAATGGAAGTAAAATTATGAGTCAAGGTGGAGTAGTTGGGAAGATGGTGTTTGTAGTCCGTGGAAAATTGGAGAGCATTGGAGAAAATGGAATTGGAGTTTCTTTATCTGAAGGTGATGCTTGTGGTGAAGAACTACTCACATGGTATCTTGAACATTCTTCTGTAAGCAAAGATGGTAAAAAAGTAAGGCTTCCAGGGCAGAGGTTAATTAGCAACAGAACAGTTAAGTGCTTAACAAATGTGGAAGCTTTTTCACTAAAAGCTGTTGATCTTGAAGAAGTCACCACGATTTTCATGAGATCCTTTCGAAGTGTTCTTGTTCAAGGACCTCTAAGGTATGAATCACCTTATTGGAGATCCCTTGCAGCAACTAGAATTCAAGTTGCATGGAGATATTGGAAGAAACGTCAAAAGTTAACAGACCAAACATTGAAGTTATAG 2103 0.3833 MESQKTQTSLKNGHAGELCNVVVIGNKEENFKKEKVSPFNVKGEKQRNSNHDGENEYLERSGPLGMCDDPYCTTCPTYFKASQQRNPKYSNEFDPKFQNALYGDAKGFGRNFLSFCSSCVPGVINPHTKLVQQWNKFLAIFCMVAIFVDPLFLFLIYVQKDFNCIAMDWKLTETLVLLRSMNDSVYFLNILLQFRLAYVSPESRVVGAGDLVDDPKKIAVRYLQSYFLLDLFVVLPLPQIMILTVLPRHLGLSGANYAKNLLRAVILVQYIPRLFRILSLLNGRSPTGFIFESARANFIINLLMFMLASHVVGSSWYLFGLQRVNQCLRDACNKSNIKGCIDVIDCGHGRNRTKQSPDQTSVMWNNNSDAIACLNPSPNGFRYGIYVTAVPLTFETNVVNKYVYSHFWGLQQISTLAGGLTPSYFVWEVVFTIAIIGLGLLLFALLIGNIQNFLQGLGRRRLEMLLRGRDVEQWMRHRRLPEDLKRRVQQAERYNWAATRGVNEETLLENLPEDLQIDIRRHLFNFIKKIRIFSLMDEPILDAICERLRQKTYINGSKIMSQGGVVGKMVFVVRGKLESIGENGIGVSLSEGDACGEELLTWYLEHSSVSKDGKKVRLPGQRLISNRTVKCLTNVEAFSLKAVDLEEVTTIFMRSFRSVLVQGPLRYESPYWRSLAATRIQVAWRYWKKRQKLTDQTLKL* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3506 700 ProSiteProfiles cAMP/cGMP binding motif profile. 532 600 IPR000595 -
Mal6g3506 700 MobiDBLite consensus disorder prediction 35 55 - -
Mal6g3506 700 Gene3D - 129 456 - -
Mal6g3506 700 Gene3D Jelly Rolls 530 654 IPR014710 -
Mal6g3506 700 SMART cnmp_10 532 667 IPR000595 -
Mal6g3506 700 SUPERFAMILY Voltage-gated potassium channels 126 460 - -
Mal6g3506 700 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 16 697 - -
Mal6g3506 700 SUPERFAMILY cAMP-binding domain-like 462 649 IPR018490 -
Mal6g3506 700 Gene3D Helix hairpin bin 466 524 - -
Mal6g3506 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 16 697 - -
Mal6g3506 700 ProSiteProfiles IQ motif profile. 673 700 IPR000048 GO:0005515
Mal6g3506 700 CDD CAP_ED 532 648 IPR000595 -
Mal6g3506 700 Pfam Ion transport protein 136 459 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3506 Mal-Chr6 103268858 103292419 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3506 45 610 Ion Channels AT3G17700 61.996 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3506 K05391 - ccaj:109789004 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3506 6 103268858 103292419 Mal6g3506 6 103268858 103292419 ECH