Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3504 ATGGCTATGCTCGAATCATCTTTCTCTTTCTCTTCCTTCTCTTATGGATTCACCTATGAGGTGTTCCTTAGTTTTAGGGGCACTGACACTCGCTATGGTTTTACTGGAAATCTCTACGAAGCTCTATGTAAAGGTGGAGTCCGTACCTTCATTGACCATAAGGAGCTTGATGGAGGTGAAGAAATCACACCATCACTTGTCAAGGCCATTGAAGAGTCTAGAATTTTCATTCCAGTCTTCTCTAAGGACTATGCTTCTTCTTCGTTTTGTTTGGACGAGCTTGTCCACATCATTCAGTGCTACAAGGCAAAGGGTTGCTTGGTTTTGCCTATTTTCTATGACGTAGAACCAACTGACCTGCGACATCAGACTGGGAGTTATGGTGAAGCAATAGCTAGGCATGAAGAGAGGTTCCAAAATAACAAAGAAAAGTACAACGATAACATGAAGAGGCTGCATAAATGGAATATTGCTCTTAATCAAGCAGCTAATTTGTCTGGCCGCAATTTCAATCCTAGGAATGAATATGAATATGAGTTTATTCAAGAGATAGTCAAATATGTATCCAACAAGATTAGTCGTGTTCCTTTACACGTTGCCGATTACCCTGTTGGCCTGCAGTCTCGAGTCCTAAAAGTAAAATCACTTCTGGATCTTGGATCTGAAGAAGAAGTGCGGATAATAGGGATATGTGGGCCTGGAGGCATAGGTAAGACAACACTTGCAAAAGCGGTTTATAATTTCGTTGTTGATCAATTTGAATGTGTGTGTTTTCTCCACAATGTGAGAGAAAATTCAGCAAAACATGGTTTAGAGAATCTCCAAAAAGATTTGCTTTCCGAAACTGTTGGATTGGATTTTAAGTTAAAAGATAGCTCTGAGGGAATTTCAACCATAAAGCAAAGGCTACACCGAAAAAAGGTTCTTTTGATTCTCGATGACGTTGATGAATTGAAGCAGCTGCAGGTTTTGGCTGGAGGGCTTGATTGGTTTAGTGTCGGTAGTAGAGTGATCGTTACCACTCGAGACAAACACTTGCTAGCCAGTCATGGGATTGAAGTAACATACGCAATAGATAAGTTTAATAAGAAAGAAGCGCTTGAATTGCTTAGGTGGAAGGCTTTTAAAAGTAAGCAAGTTGATTCAAGTTATGAGAAAATTTTAACCCGTGCCGTAAATTATGCTTCTGGCCTTCCATTGGCCTTGGAAGTATTAGGTTCCAACTTGAATGGAAAGCATATAGAAGAATGGAGTTCTTTGTTGGATCGGTATGAAAGGATTCCTAGTAAAAAGATCCAAAAGATACTTAAAGTGAGTTTTGATGCTTTGGAGGAAGATGAGCAAAGTGTTTTTCTCGACATTGCTTGTTGTTTCAAAGGGTATGAATTGAAAGAGGTGGAAGATATGCTTTGTGCTCATTATGGTCAATCCATGAAATATCATATAAGAGTGTTGGTTGAAAAATCTCTTGTAAAGATAAGTAAAGGGGGCTATGTGAAATTACATGACTTAATAGAAGACATGGGTAAAGAAATTGTAAGACAAGAATCGCCAAAAGAGCCTGAGAAACGTAGCAGGTTGTGGTTCCATGAAGATATATTTAAAGTTTTAGAAGAAAATTCAGGGACAGGTCAAATTGAAATTATACATTTGGATTTTCCCTTACCTGAAGATATAGTAGAATGGGAAGGAGATGAATTCAAGAAGATGAAAAACCTCAAAACACTTATTGTTAAAACTAGTTTCTTTTTCAAACCTCATTTACATCTTCCGAATAGTTTAAGAGTACTGGAATGGCATGGTTTACCGGATATACCATCTGGTTTTATTCCAAAGAACCTTTTCATATGCAAGTTACGCAAAAGTTGCCTCACATTATTTAAGTTGATAGACGCGAAGATGTACATGGGTATGAAATTTTTACATTTAGACGAGTGTAAATATTTAACAGAAATAAGTGACGTATCTGGTCTCCAAAATTTAGAAGAATTTTCATTTCAAAGGTGTAAGAATTTACTTACAATTCATGATTCTATTGGGTTCCTGAAAAAACTTAAAATCTTGAATGCTGAAGGTTGTAGCAATCTCAAGAGTTTTCCACCAATTCAATTGACATCTCTTGAACAACTTGAACTATCAGATTGTTATATGCTTAAGAACTTTCCAGAAATATTAGGAAAGATGGAAAACATTGAAAGCATTAAATTTTGTGCAACTTCCATTGAAGAATTGCCTGATTCATTTCAAAATCTCATTGGGCTTCATAATTTACAACTATATGGACTTGGAACATTGCTTAGGTTGCCAAGTAGCATTCTCATGATGCCTAAATTGTCTTCCATTTATTCGTATGGTTATGATCCATTGCCAAACCAGAGCGATATGCCAAGTTCCATGGTGTCCTTACAATCTCTTTATCTTACAAAATGCAACCTAACAGATGAATGTTTTCCAATAGTTCTCAAGTGGTTTGATAATGTAACATACTTAGACTTATCGAAGAGTAATTTGACAATTCTTCCGGAATCCATCAAAGATCATCGCTCTTTAAGGAAACTCAAACTGGATGGTTGCACCCGTCTTCAAGAAATTAGAGCGATTCCTCCAAACTTAAAATTCTTGTCAGCATTGAATTGTGAATCTTTGAGTTCCTCGTGCAGAAGCATGCTAATGGCTCAGGAACTGCATGAAGTTGGAGGCACCATGTTTTGTTTGCCAGGAACTGCAATGATTCCCGAGTGGTTTGAGTACGAAAATAAGGGATCGTCCATTTCTTTCTGGTTTCGTAACAAGCTCCCTTCCATTGCTATCTTCTTTACTACTGAATGGATGTTTGAAAAGAACTCCAGCTCTCTATTCCATTTATCCTTCACCAATCTAATCATCAATGGCTCTAAATGTGCTCTTCATGATCCATTTAATGAAACTAATGTCCTTATAGAACGGGATCATACATGTCTGTTTGATTTGCGACTACAAGACAGGGTAGGATGGGATGAAGCACTTTTAAAAAGTGAATGGAACCATGCGGAGGTTACATATGAGATTTCGTTAGTGACATTACTTCTTAAGGAAAGTCGAATGCACATATTCCAACAAGAAAGTAGCATGGACGATATTCAATTCACCAATCCTTATAAAAACAGAGAATTGGATGATGGTGATGATGATGATGTTGATATTGGTGATGATTATGTTAAGGATGATAATGATGATGATGATTATGTTGTTGGTAATGATGAAGATGATGAAGACGACGAAGACCACCATTCACAATAG 3279 0.3721 MAMLESSFSFSSFSYGFTYEVFLSFRGTDTRYGFTGNLYEALCKGGVRTFIDHKELDGGEEITPSLVKAIEESRIFIPVFSKDYASSSFCLDELVHIIQCYKAKGCLVLPIFYDVEPTDLRHQTGSYGEAIARHEERFQNNKEKYNDNMKRLHKWNIALNQAANLSGRNFNPRNEYEYEFIQEIVKYVSNKISRVPLHVADYPVGLQSRVLKVKSLLDLGSEEEVRIIGICGPGGIGKTTLAKAVYNFVVDQFECVCFLHNVRENSAKHGLENLQKDLLSETVGLDFKLKDSSEGISTIKQRLHRKKVLLILDDVDELKQLQVLAGGLDWFSVGSRVIVTTRDKHLLASHGIEVTYAIDKFNKKEALELLRWKAFKSKQVDSSYEKILTRAVNYASGLPLALEVLGSNLNGKHIEEWSSLLDRYERIPSKKIQKILKVSFDALEEDEQSVFLDIACCFKGYELKEVEDMLCAHYGQSMKYHIRVLVEKSLVKISKGGYVKLHDLIEDMGKEIVRQESPKEPEKRSRLWFHEDIFKVLEENSGTGQIEIIHLDFPLPEDIVEWEGDEFKKMKNLKTLIVKTSFFFKPHLHLPNSLRVLEWHGLPDIPSGFIPKNLFICKLRKSCLTLFKLIDAKMYMGMKFLHLDECKYLTEISDVSGLQNLEEFSFQRCKNLLTIHDSIGFLKKLKILNAEGCSNLKSFPPIQLTSLEQLELSDCYMLKNFPEILGKMENIESIKFCATSIEELPDSFQNLIGLHNLQLYGLGTLLRLPSSILMMPKLSSIYSYGYDPLPNQSDMPSSMVSLQSLYLTKCNLTDECFPIVLKWFDNVTYLDLSKSNLTILPESIKDHRSLRKLKLDGCTRLQEIRAIPPNLKFLSALNCESLSSSCRSMLMAQELHEVGGTMFCLPGTAMIPEWFEYENKGSSISFWFRNKLPSIAIFFTTEWMFEKNSSSLFHLSFTNLIINGSKCALHDPFNETNVLIERDHTCLFDLRLQDRVGWDEALLKSEWNHAEVTYEISLVTLLLKESRMHIFQQESSMDDIQFTNPYKNRELDDGDDDDVDIGDDYVKDDNDDDDYVVGNDEDDEDDEDHHSQ* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3504 1092 ProSiteProfiles TIR domain profile. 17 192 IPR000157 GO:0007165
Mal6g3504 1092 SMART till_3 18 165 IPR000157 GO:0007165
Mal6g3504 1092 Pfam NB-ARC domain 210 441 IPR002182 GO:0043531
Mal6g3504 1092 Pfam TIR domain 19 192 IPR000157 GO:0007165
Mal6g3504 1092 PANTHER ARCHAEAL ATPASE 29 1014 - -
Mal6g3504 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 454 IPR027417 -
Mal6g3504 1092 SUPERFAMILY L domain-like 557 915 - -
Mal6g3504 1092 SUPERFAMILY "Winged helix" DNA-binding domain 430 538 IPR036390 -
Mal6g3504 1092 MobiDBLite consensus disorder prediction 1042 1092 - -
Mal6g3504 1092 Gene3D Ribonuclease Inhibitor 721 899 IPR032675 -
Mal6g3504 1092 SMART AAA_5 224 359 IPR003593 -
Mal6g3504 1092 Gene3D Ribonuclease Inhibitor 530 720 IPR032675 -
Mal6g3504 1092 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 167 IPR035897 -
Mal6g3504 1092 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 1014 IPR044974 GO:0006952
Mal6g3504 1092 Gene3D - 361 444 IPR042197 -
Mal6g3504 1092 Gene3D - 16 189 IPR035897 -
Mal6g3504 1092 PRINTS Disease resistance protein signature 395 409 - -
Mal6g3504 1092 PRINTS Disease resistance protein signature 302 316 - -
Mal6g3504 1092 PRINTS Disease resistance protein signature 702 718 - -
Mal6g3504 1092 PRINTS Disease resistance protein signature 227 242 - -
Mal6g3504 1092 MobiDBLite consensus disorder prediction 1053 1092 - -
Mal6g3504 1092 Gene3D - 190 354 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3504 Mal-Chr6 103251427 103257331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3504 10 844 WRKY Transcription Factor Family AT4G12020 29.487 1.67e-75 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3504 - - gmx:100780257 1114.37