Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3502 ATGAATCATTTTGATAAAGATGAAATTCCGATGCTGTCAGAAACACGTGCACAACGATCTGATGACCCTCAGGATTCTACCTTCAGAAGAAACATATCGAGGACACGGAGTGCTTCAATTTCTATTCCTATGGCTTCTCTGGATCCATATGAGAGACAACCGAATCTTGTCGGACATACTGGTCCGCTTCGTACCGTGAGGAAAACTCCTGTTAGCCAAATGAGTGGTCCACTATATGCTACTCCTGCAACTGGAAATCCTTTTCAGAATAGTATAATAATGGCAGGAAACAAAGTAGGGGAGAACAAGACAGAAAAGTTTTCTACATTTGATGGCACGGATAAAAATGAACACTTGTTGAGGTCTGGACAACTAGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTACTTTAAAGTTGCTCAGCAAAGAAAACCAAGAGCTTCCACTATATTTGATCACAAGTACAATTCTCTTTATGGCGACGCCAAAGGTTTTGGAAGAAAACTTTGTTCTTTCTGCTCTTCATGTATTCCTGGAGTTATGAACCCTCACGCGAAAGTTGTACAACAATGGAACAAGTTTTTGGCCATATTTTGCATGCTCGCAATTTTTGTTGATCCGTTATTTTTCTTCTTACTCTATGTGCACAAGCATAATAAATGTATTCAAATCAACTGGACAATGGCAAATACACTTGTTATAGTTAGAAGCATAACTGATTTCGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCTAGGGTTGTTGGTGCTGGTGATTTAGTTGACCATCCCAAGAAAATAGCTGCTAATTACCTTAAGAGCTACTTTTTATTCGACGCATTTGTTGTATCACCTCTTCCTCAGATAATGATAATGTTTATCCTACCACATTCCTTGGGGTCATCAGGAGCAAATTATTTTAAGAATCTTCTACGTCTAGCGATCCTTGTACAATATATTCCTAGATTATTCAGATTTTTGCCTCTGCTAATTGGTCAGTCTCCAACCGGATTCATATTCGAGTCAGCCTGGGCAAATTTTATTATAAATCTTCTCATTTTTATGCTATCCGGCCACGTTGTTGGTTCATGCTGGTACCTCTTTGGTCTACAGAGGGTTAACCAATGTTTGCGAGAGGCCTGCCGTCGTACCAACCTACCTGGATGCATGGATTTGATTGATTGTAAATCTAAATGGGGGAATATATCAGCTACATGGAGTCATGATAAGGGTGCTGATGCTTGTTTGAATTCTTCATCTGATGTTTTTCCTTATGGAATCTATGCCAATGCTGTAGAACTTACTACAGAAACTAGGGTGATCAACAAATATGTGTATGCACTGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAATCAAGAACCAAGCTATTTTGTTTGGGAAGTTCTCTTTACAATGTCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTGCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGGTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAACCATCGTCGCTTACCAGAAGATCTTAAAAGGAGAGTACGACAGGCGGAACGGTATAGTTGGGCTGCAACAAGGGGTGTTCCCGAGAGAATGGTTCTGGAGAATTTGCCAGAAGATCTCCAGACAGACATAAGACGCCATCTCTTCAAATTTGTTAAAAAAGTTCGAATTTTTTCCCTGATGGCTGAGGATGAACCTATCTTAGACGCCATTCGTGAGAGACTAATACAGACAACATACATTAAAGGAAGTAGAATTCTCAGTCAGGGTGGTCTCGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCATCGGAGAAGATGGAATTCCTGTTCCGTTATCAGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAGCAAAGAAGGTAAAAAAGTAAAGCTTCATGGACAGGGTTTGACTAGCGACAGAACAGTAAGATGCTTAACCAATGTTGAGGCATTTTCACTCCGCGCTAAAGACATTGAAGAAGTCACAACTCTTTTTGCAAGATTTTTGCGGAGCCCTCGTGTTCAAGGAGTTATAAGGTATGAATCGCCTTATTGGAGATCACTTGCAGCAAACAGAATTCGGGTTGCATGGAGATACAGAAAGAAGCGTCTAAGTCGAGCTAGTACCACACAAAATGATTATCAAACATTGATGCCATAG 2286 0.4059 MNHFDKDEIPMLSETRAQRSDDPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHTGPLRTVRKTPVSQMSGPLYATPATGNPFQNSIIMAGNKVGENKTEKFSTFDGTDKNEHLLRSGQLGMCNDPYCTTCPTYFKVAQQRKPRASTIFDHKYNSLYGDAKGFGRKLCSFCSSCIPGVMNPHAKVVQQWNKFLAIFCMLAIFVDPLFFFLLYVHKHNKCIQINWTMANTLVIVRSITDFVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAANYLKSYFLFDAFVVSPLPQIMIMFILPHSLGSSGANYFKNLLRLAILVQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLREACRRTNLPGCMDLIDCKSKWGNISATWSHDKGADACLNSSSDVFPYGIYANAVELTTETRVINKYVYALFWGFQQISTLAGNQEPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRVEMQLRGRDVEQWMNHRRLPEDLKRRVRQAERYSWAATRGVPERMVLENLPEDLQTDIRRHLFKFVKKVRIFSLMAEDEPILDAIRERLIQTTYIKGSRILSQGGLVQKMVFIVRGKLESIGEDGIPVPLSEGDACGEELLRWYLEQSSESKEGKKVKLHGQGLTSDRTVRCLTNVEAFSLRAKDIEEVTTLFARFLRSPRVQGVIRYESPYWRSLAANRIRVAWRYRKKRLSRASTTQNDYQTLMP* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3502 761 CDD CAP_ED 585 703 IPR000595 -
Mal6g3502 761 Pfam Ion transport protein 196 512 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal6g3502 761 Gene3D Helix hairpin bin 512 577 - -
Mal6g3502 761 ProSiteProfiles cAMP/cGMP binding motif profile. 595 655 IPR000595 -
Mal6g3502 761 MobiDBLite consensus disorder prediction 1 35 - -
Mal6g3502 761 SUPERFAMILY cAMP-binding domain-like 513 706 IPR018490 -
Mal6g3502 761 Gene3D Jelly Rolls 583 709 IPR014710 -
Mal6g3502 761 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 752 - -
Mal6g3502 761 SUPERFAMILY Voltage-gated potassium channels 189 513 - -
Mal6g3502 761 Gene3D - 194 510 - -
Mal6g3502 761 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 752 - -
Mal6g3502 761 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3502 Mal-Chr6 103122350 103128164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3502 2 663 Ion Channels AT3G17700 59.824 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3502 K05391 - ccaj:109789004 1160.21