Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3501 ATGAATTATTTTGATAAAGATGAAATTCCGATGTTGTCAGAAACATGTGCACAACGATCTGATGATCCTCAGTATTCTGCCTTCCGAAGAAACATATCGAGGACACGGAGTGCTTCAATTTCTATTCCTATGAGAGAACAAGACATAAAAAATCTTCAAGGAAACATGAATTATTTTGATAAAGATGAAATTCCGATGCAGTCAGAAACATGTGCACAACGATCTGATGATCCTCAGTATTCTGCCTTCCGAAGAAACATATCGAGGACACAGAGTGCTTCAATTTCTATTCCTATGGCTTCCCTTGCTCCACATGAGGACGAGTTCCGCAATCTTCCCAATGGTAACAACAAAGGTTTTGGAAGAAAACATTTATCTTTCTGCTCTTCATGTATTCCTAGAGTTATGAAACCTCACACCAAAGTTGTACAACAATGGAACAAAATTTTGGCCATATCTTGCTCTATCGCAATTGTTATTGATCCGCTATTTTTCTTCTTATATTATGTGAAAAAGGATGATAAATGTATTGTTATCAATTGGACATTGGCAATGCCACTTGTTTTACTAAGAAGCATAACGGATGTGCTGTATTCCTTGAGCATTCTTCTCCAATTTAGGTTGGCTTATATTAATCCTGAGTCTAGGGTGTTTGATGATGGAGATTTAATTATCCATCCCACGAGAATTGCTCTTAATTACTTGAAGACTTACTTTCTCATCGACTTATTTGTTGTATTACCTCTTCCTCAGAGGGTTAACAAATGTTTGCGACATGCCTGCCATCATTCTAATCTACTTGGATGCATGGACTTGATTGATTGTGATCCTAAAGTGGGGAATATATCAGCCAAACTTTGGAGTGAAGATAAGGGTGCTGATGCTTGTTTCAATGCCACATATGATGATGTTTTTTCTTATGGAATCTATGCCAATGCTATACCGCTTACTATAGAAACTAAGTTAATCCACAAATATGTGTATGCATTCTTTTGGGGATTCCAGCAAGTCATAACTCTGGCTGGTAATCAAACTCCAAGTTATTTTGTGTGGGAAGTCCTCTTTACAATATCCATCATGGCATTGGGACTCTTGCTTCTAGTGCTTTTCATCGGAAACATACAGGGCTATTTTCAGTCTCTTGGCAAGAGTAGCCTAGAAATGATGCGCAGAGGCCGTGATGTTGAGCAATGGATGAGCCATTGTCGGTTACCAGAAGATCTTAAAAAGAGAGTAAGACAGGCTGAACAGTATAGTTGGGTTGCAATAAGGGGTGTTCCTGAGAAAATGGTTCCGGAGAGTTTGCCCGAAGATCTCCAGACAGACATAAGACGCCATCTCTTCAAATTTGTTAAAAAAGTTCGAATTTTTTCCCATCTGAATGAGGATGAGCCTGTCTTAGATGCCATTCGTGAGCGACTAATACATACGAGGTACATGAAAGGAAGTAGAATTTTGAGTCAGGGTGGTCTTGTACAGAAGATGGTGTTTATTGTGTGTGGAAAATTGGAGAGCATCGGAGAAGATGGAACTCCGATTCGGTTATCCGAAGAGGATACTTGTGGTGAGGAGCTTCTAAGTTGGTATCTTGATCAGTCTTCCGAAGGAAAAGGTAAAAAAGTAAAGCTTAAAGGACATGGCTTAACTAGTGACAGAACAGTAAGATGCTTAACCTATGTGGAGGCATGTTCACTCCACGCTGAAGACATAGAAGAACTCACAAATCGTTTTGCAAGATTCTGGCAGAGCCCTTACGTTCAAGGAGTCATAAGGTATAAATCACCTTATTGGAGATCACTTGCAGTGAAGAGAATTCAGGCTGCATGGAGACACAGGAAAAATCGTCTAAGCCAAGCTAATACCACACAAAAGGATTCACACACATTGAGGTATGAATGGCCTTATGGGAAATCACTTAGTGGAAATTAA 1929 0.3945 MNYFDKDEIPMLSETCAQRSDDPQYSAFRRNISRTRSASISIPMREQDIKNLQGNMNYFDKDEIPMQSETCAQRSDDPQYSAFRRNISRTQSASISIPMASLAPHEDEFRNLPNGNNKGFGRKHLSFCSSCIPRVMKPHTKVVQQWNKILAISCSIAIVIDPLFFFLYYVKKDDKCIVINWTLAMPLVLLRSITDVLYSLSILLQFRLAYINPESRVFDDGDLIIHPTRIALNYLKTYFLIDLFVVLPLPQRVNKCLRHACHHSNLLGCMDLIDCDPKVGNISAKLWSEDKGADACFNATYDDVFSYGIYANAIPLTIETKLIHKYVYAFFWGFQQVITLAGNQTPSYFVWEVLFTISIMALGLLLLVLFIGNIQGYFQSLGKSSLEMMRRGRDVEQWMSHCRLPEDLKKRVRQAEQYSWVAIRGVPEKMVPESLPEDLQTDIRRHLFKFVKKVRIFSHLNEDEPVLDAIRERLIHTRYMKGSRILSQGGLVQKMVFIVCGKLESIGEDGTPIRLSEEDTCGEELLSWYLDQSSEGKGKKVKLKGHGLTSDRTVRCLTYVEACSLHAEDIEELTNRFARFWQSPYVQGVIRYKSPYWRSLAVKRIQAAWRHRKNRLSQANTTQKDSHTLRYEWPYGKSLSGN* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3501 642 Gene3D Helix hairpin bin 386 448 - -
Mal6g3501 642 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 49 - -
Mal6g3501 642 SUPERFAMILY cAMP-binding domain-like 383 582 IPR018490 -
Mal6g3501 642 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 251 622 - -
Mal6g3501 642 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 59 112 - -
Mal6g3501 642 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 124 252 - -
Mal6g3501 642 SUPERFAMILY Voltage-gated potassium channels 139 379 - -
Mal6g3501 642 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 251 622 - -
Mal6g3501 642 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 59 112 - -
Mal6g3501 642 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 124 252 - -
Mal6g3501 642 CDD CAP_ED 456 573 IPR000595 -
Mal6g3501 642 Gene3D Jelly Rolls 454 579 IPR014710 -
Mal6g3501 642 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3501 Mal-Chr6 103057491 103099880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3501 251 538 Ion Channels AT3G17700 55.709 1.63e-95 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3501 K05391 - oeu:111402769 480.715