Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3498 ATGCTTAGATATTTTCATGTAATAATGCAAAATTTAACCTTGGTAAATTCTGAACACAGCATGGCTGAGTTTGGGAATGATGAGGTGCCAATTCTGTCACATACTATTCTGTCAGATACTAATCCAACACCATCAAATGAACCTCATGGTTCTAAATTCCAGAATCATGTACATAGGACGCGAAGTGTATCGATTTCTATTCCCATGATTCCTATGGAACCATATGAAAGAGATACTAATTTCAAGGGACACACAGGTCCTCTAAGGAGTCAAAGAAAAGCTTCATTTAATCCAATGAGTGGTCCATTATATGTTACTCCTAGACCTGGAAATCTTTTCGGGCAGAATACTGTCGCGCCGAGGAGCATAGCAGTGGAAAGTAAGACAGAAAAGTTTCCTTTATGTGGCATGAAAGGAAATGATTTGCAGAATAACTATGCTGGTAAAAATGAACATTTAGTAAGGTCTGGTCCATTGGGAATGTGTAATGATCCTTACTGTACTACTTGTCCAACTTACTTCAAGGCTACTCAACAAAGGGAATCGAAAAATTCGGGTTTGTTTAACCCCAAGAATGTTCTCTATGGTGATGCAAAGGATTGGGCAAGAAGACTTTTTGCTTTCTTGATTCCAAATGTACCTAGAGTAATGAATCCTCATAATAATCTTGTACAACAATGGAATAAATTTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTATCTGTGGATAAGGAACATAAATGTATTGTTCTTAACTCAACAATGACAACAGTGCTTGTTTTTCTTAGAAGTATGAATGATTTCATACATTTCCTAAATATTCTTCTTCAGTTTAGGCTGGCTTATGTGGCCCCTGAGTCTAGGGTGGTTGGTGCTGGAGAATTAGTTGACCATCCTAAGAAAATAGCTCTTCACTATCTTCAGACATATTTTCTTTTTGACTTGTTTGTTGTTCTTCCACTTCCTCAGATAATGATATTGTTTGTACTACCAAAACACTTGGGAACATCAGGAGCAAACTACGCAAAGAATCTTTTGCGCGCTGTCATCCTTGTTCAGTACATTCCAAGATTGTGTAGATTTCTCCCTATGCTAATTTCTCCAACCGGATTCATATTTGAGTCGGCATGGGCAAGTTTCTTTTTAAATCTTTTTACCTTTATGCTATCTGGCCATGTTGTTGGATCATGGTGGTACCTCTTTGGTTTGCAGAGGGTTAATCAATGTCTACGAAATGCATGCTATAATAAATATTTTGGTGAATGCTCAAAATTCATTGACTGTGGTCATGGACGCACCGAGGAATATCAAAATGGATCAAATTGGGCTCATTGGATGAAAAATGACAATGCAAGTGCTTGTTTTACAGAAGATGGTTTTAAGTATGGGATTTATGTTAAAGCAGTCAACCTTACTACAAATCATAATGTGCTTACAAGATATGTATATTCATCATTTTGGGGATTTCAGCAAATTAGTACTCTGGCAGGAAATCTGTCACCAAGCTATTTTATTTGGGAAGTCCTTTTTACCATGGGAATCATTGGATTAGGACTCTTGCTTTTTGCTCTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGGAAGAAGGAGGCTAGAAATGTCACTTAGACAACGCGATGTTGAGCAATGGATGAGCCATAGGCGATTAGAAGAAAATCTGAGAAGGAGAGTGCGACAAGCTGAACGTTACAACTGGGCTGCAACGAGAGGAGTCAATGAAGAAATACTCATGGAGAATTTGCCAGAAGATCTTCAGAGGGACATCAGACGACATCTCTTTAGATTTGTTAAGAAGGTTCGAATTTTTTCCTTGATGGATGATCCTATCTTGGACGCCATTTGTGAGAGACTAAGACAAAAAATTTACATCAAAGGAAGCAAAATTTTGTATGATGGTGGCTTAGTAGAGAAGGTGGTTTTTGTTGTGCGCGGAAAATTGGAGAGTATTGGTGAAGATGGAATTCGAGTTCCTCTGTCGGAAGGCAATGTTTGTGGTGAAGAACTTCTTACCTGGTGTCTTGAGCATTCTTCAGGAAACAAAGTTTGTGGGAAAACAAGAATTCCAAGACAAAGGTTAGTTAGCAATAGGACAGTATTGTGCCTAACAAATGTTGAGGCATTTTCCCTTAGAGCAGCAGACCTTGAAGAAGTTACAAGCCTTTTTGCAAGATTCTTGAGGAGTCCTGGTGTTCAAGGAGCCATAAGGTATGAATCACCTTACTGGAGATGTCTTGCAGCTACGCGAATCCAGGTTGCATGGAGATACAGAAAAAAGCGTCTTTGTCGTGCTGACACTTCACAATCAAATAATGAAGCATCAAAGTTGTAA 2385 0.3841 MLRYFHVIMQNLTLVNSEHSMAEFGNDEVPILSHTILSDTNPTPSNEPHGSKFQNHVHRTRSVSISIPMIPMEPYERDTNFKGHTGPLRSQRKASFNPMSGPLYVTPRPGNLFGQNTVAPRSIAVESKTEKFPLCGMKGNDLQNNYAGKNEHLVRSGPLGMCNDPYCTTCPTYFKATQQRESKNSGLFNPKNVLYGDAKDWARRLFAFLIPNVPRVMNPHNNLVQQWNKFFAICCLVAIFVDPLFFFLLSVDKEHKCIVLNSTMTTVLVFLRSMNDFIHFLNILLQFRLAYVAPESRVVGAGELVDHPKKIALHYLQTYFLFDLFVVLPLPQIMILFVLPKHLGTSGANYAKNLLRAVILVQYIPRLCRFLPMLISPTGFIFESAWASFFLNLFTFMLSGHVVGSWWYLFGLQRVNQCLRNACYNKYFGECSKFIDCGHGRTEEYQNGSNWAHWMKNDNASACFTEDGFKYGIYVKAVNLTTNHNVLTRYVYSSFWGFQQISTLAGNLSPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRQRDVEQWMSHRRLEENLRRRVRQAERYNWAATRGVNEEILMENLPEDLQRDIRRHLFRFVKKVRIFSLMDDPILDAICERLRQKIYIKGSKILYDGGLVEKVVFVVRGKLESIGEDGIRVPLSEGNVCGEELLTWCLEHSSGNKVCGKTRIPRQRLVSNRTVLCLTNVEAFSLRAADLEEVTSLFARFLRSPGVQGAIRYESPYWRCLAATRIQVAWRYRKKRLCRADTSQSNNEASKL* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3498 794 CDD CAP_ED 620 736 IPR000595 -
Mal6g3498 794 Pfam Ion transport protein 227 548 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal6g3498 794 Gene3D Helix hairpin bin 548 612 - -
Mal6g3498 794 SUPERFAMILY cAMP-binding domain-like 548 740 IPR018490 -
Mal6g3498 794 Gene3D - 228 545 - -
Mal6g3498 794 ProSiteProfiles cAMP/cGMP binding motif profile. 620 688 IPR000595 -
Mal6g3498 794 SUPERFAMILY Voltage-gated potassium channels 219 548 - -
Mal6g3498 794 Gene3D Jelly Rolls 618 742 IPR014710 -
Mal6g3498 794 MobiDBLite consensus disorder prediction 78 99 - -
Mal6g3498 794 MobiDBLite consensus disorder prediction 39 58 - -
Mal6g3498 794 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 52 783 - -
Mal6g3498 794 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 52 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3498 Mal-Chr6 102918788 102926097 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3498 26 698 Ion Channels AT3G17700 61.290 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3498 K05391 - gmx:100795955 1220.3