LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal6g3493	ATGAATGCTTCAACGAAAAAGAAAATTCAGAAGAAGTGCAAAATCAGAGGCTACAACATCAAACCCGAAGCACTCGACGAAATCCTCTCTTTCGTTACTCGCTTTGAACGCACTGAAGAAGATGAAGCCATCGATCTCGTCCTTGATCAACTTGAACACGAATCTCTGAAATCTACCATAATCGATGTGGAACCGGTGCAGCGAGTGGTGAACTTGCTATTGGAAGCCGATGGGGCGGAGGAAACTACTGATACTTTTGCTTCCTCTTCTTCTTCCGCTATTGGTGTCATTGATGTGTTCAACGTTCCTAGATATAAATACGACGCTATCAGAAGGAATTTCTACCAACACCCAGGAAGCTTACCTATTCTTGGGGACCCACCAGCAAAATCTGCTCTGTACAGGGATAGGTTTTTGTTGTTGTCTCAAAGGCTTTCTCGTCACCAGGATTTTTCGAGGCCTGCTTTTGAGTCTGAACTTTCACAATTTCGTAGTTGTGAGATATCTCCTATTCAATCTCTTGTTGGGCGAAAAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGTTGGAGGATGGGCATTTTTATTTGGAAGACCTTACCGCTTCTTGTATGGTCATTAGTTTCTTTGACTATTCATACAAGATTACTACAGGATTCTTCTTAGAGAACACCATAGTTGTGGCCGAAGGCGAGATGCTCGCAGAGGGTATTTTTCAGATTTTTACATGTGGGTTTCCTCCATTAGAGGATAGAGATATATCACTTCAAGTGATTGCGGGACATGACTTTTTTGGTGGTGGTACTTTTACAAAAGAAGAAACGATCAGGCAGGCAGAGATGGAAAAAAGAGCCGTCAATGACATGTTTGTCATATTATCTGATATCTGGCTAGACAAAGAAGAGACTTTTGGAAAGCTAGAGATTGTCCTTGATGGTTTTGAGAGTGTGGAAGTGGTACCTTCCTTGTTTGTTTTCATGGGAGACTTCTGTTCTGAGAAATGTAGCCTAGCATTTAACGCTTATTCAAGCCTAAGGACGCAGTTTGGCAAGCTAGGGCAAATTATTGCTGCCCATCCACGCTTAAAAGAGAACAGCCGATTTCTTTTTATTCCAGGTCCTGGCGATGCAGGTTCAACAGCTCTTCCTAGGTGTGGTCTGCCTAAATATTTAACTGAGGAGCTCCAAAAGTATATTCCCGATGCCATATTTTCAAGCAATCCCTGCAGGGTAAAATTCTATACCCAAGAAATTGTATTTTTCCGCCAAGATCAGCTGTATAACATGCGTCGTTCTTGTTTAATGCCACCCTCTGAGACAGAAACTACTGATCCTTTTCAGCATCTTGTTGCCACCATAACCCATCAGAGTCATCTCTGTCCACTCCCTCTAACTAAACAACAACCCATCATATGGAATTATGATCATTGCCTTCATTTATATCCTGCTCCACACACGATAGTTTTGGGAGACAGAAGTCCGCAGAAGGCTTTTAAGTACACAGGAATCACTTGTTTTAATACTGGATCCTTCTCAATGGATAGCACATTTGTAGTGTACCGTCCTTGCTCTCAGGAAGTTGAATTGTCATCCTTGTGA	1599	0.4215	MNASTKKKIQKKCKIRGYNIKPEALDEILSFVTRFERTEEDEAIDLVLDQLEHESLKSTIIDVEPVQRVVNLLLEADGAEETTDTFASSSSSAIGVIDVFNVPRYKYDAIRRNFYQHPGSLPILGDPPAKSALYRDRFLLLSQRLSRHQDFSRPAFESELSQFRSCEISPIQSLVGRKGRRWVMGVISQLEDGHFYLEDLTASCMVISFFDYSYKITTGFFLENTIVVAEGEMLAEGIFQIFTCGFPPLEDRDISLQVIAGHDFFGGGTFTKEETIRQAEMEKRAVNDMFVILSDIWLDKEETFGKLEIVLDGFESVEVVPSLFVFMGDFCSEKCSLAFNAYSSLRTQFGKLGQIIAAHPRLKENSRFLFIPGPGDAGSTALPRCGLPKYLTEELQKYIPDAIFSSNPCRVKFYTQEIVFFRQDQLYNMRRSCLMPPSETETTDPFQHLVATITHQSHLCPLPLTKQQPIIWNYDHCLHLYPAPHTIVLGDRSPQKAFKYTGITCFNTGSFSMDSTFVVYRPCSQEVELSSL*	533

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal6g3493	532	Gene3D	-	329	532	-	-
	Mal6g3493	532	PANTHER	DNA POLYMERASE EPSILON SUBUNIT B	7	531	IPR016266	GO:0003677\|GO:0006261\|GO:0008622
	Mal6g3493	532	Pfam	DNA polymerases epsilon N terminal	5	71	IPR024639	-
	Mal6g3493	532	PIRSF	DNA_pol_epsilon_2	1	532	IPR016266	GO:0003677\|GO:0006261\|GO:0008622
	Mal6g3493	532	Gene3D	-	2	72	-	-
	Mal6g3493	532	Pfam	DNA polymerase alpha/epsilon subunit B	290	495	IPR007185	GO:0003677\|GO:0006260

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal6g3493	16	501	Core DNA Replication Machinery Family	AT5G22110	64.549	0.0	642

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal6g3493	K02325		-	jre:109012089	791.956