Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3491 ATGTGTAGTAGAGGCCATTGGAGACCATCTGAGGATGAGAAGCTTAGGGAGTTGGTGGAAAGCTATGGACCTCATAATTGGAACGCCATAGCTGAAAATCTCCGAGGAAGATCAGGGAAAAGTTGTAGGTTGAGATGGTTCAATCAATTGGATCCAAGAATAAACAGAAATCCTTTCACGGAGGAAGAAGAAGAGCGTCTTATAACTTCTCATCGGATTCATGGTAATAGATGGGCAGTAATTGCAAGACACTTCCCCGGACGGACTGATAACGCTGTAAAGAATCATTGGCATGTGATGATGGCGAGGATTCGTCGAGAAAGGTATAAGATCTATGCAAAAGGTCCTCCTGATCATCATGCAATTTTCTCTCCAAATGATCATCAAACAAATTTTGAGAGAACAAATCTCCACTCTTTTGTTGAGAAGTATCATGGAAAGCATAATCAGCCTTGTGTCTCACATAGCCCTTTCCAATTTCCCAAGTTTCACTTTCATGGTCTAAGTTCTTGTTCCACAATGCTTCAAGATAAAAGTCAATCAATTGAGTTCTATGATTTTCTTCAAGTGGATTCCAATAAAAGTGAAGTAACTGATAATGCTAGAAGAGATGATGAGGAAGTCAATCAAGATGTTATGGAACTGCAGAACAAGGAAAACAATGTTCAATTCATTGATTTTTTATCTACCGGAAGTTGCTAA 702 0.3917 MCSRGHWRPSEDEKLRELVESYGPHNWNAIAENLRGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLITSHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERYKIYAKGPPDHHAIFSPNDHQTNFERTNLHSFVEKYHGKHNQPCVSHSPFQFPKFHFHGLSSCSTMLQDKSQSIEFYDFLQVDSNKSEVTDNARRDDEEVNQDVMELQNKENNVQFIDFLSTGSC* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3491 233 Coils Coil 198 218 - -
Mal6g3491 233 PANTHER MYB-RELATED PROTEIN A-LIKE 1 232 - -
Mal6g3491 233 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Mal6g3491 233 Gene3D - 57 122 - -
Mal6g3491 233 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Mal6g3491 233 SMART sant 55 103 IPR001005 -
Mal6g3491 233 SMART sant 3 52 IPR001005 -
Mal6g3491 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Mal6g3491 233 CDD SANT 7 48 IPR001005 -
Mal6g3491 233 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Mal6g3491 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Mal6g3491 233 Gene3D - 4 55 - -
Mal6g3491 233 PANTHER MYB PROTEIN-RELATED 1 232 - -
Mal6g3491 233 CDD SANT 58 101 IPR001005 -
Mal6g3491 233 Pfam Myb-like DNA-binding domain 4 50 IPR001005 -
Mal6g3491 233 Pfam Myb-like DNA-binding domain 56 99 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3491 Mal-Chr6 102795443 102800108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3491 1 232 MYB Transcription Factor Family AT1G17950 53.200 6.55e-80 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g3491 Myb_DNA-bind_6 6.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3491 K09422 - gmx:100811746 347.821