Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3488 ATGGCAGAAACAAATTCAGTTGAAGTGATTTTGGAATTTTTAAGGAGGAACCGGTTTACACGAGCTGAGGCAGCTTTGCGAAGTGAGCTCAATAACTGTTCCGATGTAGATGTAAATGGGATCCTTCAGAAGCTTACCCTGGATGAAAAGAACTTCTGTGATTTGTCGCAGAATGATAAAGGGAAGCTGGTGGTAGAAAATCGAGGGTTGGATTCTCGTGATAGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATTGAGTGTGGAACTGGTAAAAATACTACCGAGAGCAAATGGAAAAATGCTACTCCGGCTGAGGAGAGAAATAAATCTAATGAAGTTGTTGGAACGAGTGGAACGAATTTCACTTTCTTGAAGAGTTCAGAGGACAGTGTGTTTGATTTACACTCATGGAAGATTAATGGTCCTGCAGAGCTTTACCAAAATGACGGTGGAAGCAAGGCTAGTAATACATCGAAGGCCTCAATTTCTCAGCAATCAAAAGCTCAAACGAGTGAAGCCTCAATATCTCAGCAATCGAAAACTCAAATGAGTGAAGCCTTTGACGCAGCCAACAGTAATGTAAAAACTGCAGAGGAAAATAATGTTCCTGCTGAGAAAAAACCCTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTACGGAACCGAAGTTTAACCTTGTGCAAAACAAAGAATCTAGGGAAATTGATCGGCAGCAGCTTAAATTTAGTAATTCTTCACTTAAAGAGAACTTGGCAGATAATGTCTTGTCAAGAGCTGATGAGAATGAAAATTCATCCTCTGATGTATGGAAAGATTGCTCCATCAAGACTGTTTTCCCTTTCTCAAAGGGGGATGTGTCTACGAGCTATAATACCTCAACTTATTCAGAAAAAGCAGATGAAAAGAGAAAGCCAGAAATCGGTGATGCGAGGGCTTATATAAAAGAGCAGGTGGATGAAGTGGGGAGAGCTCTTGCATTGGAGAAGCAGAAGGAAGAGTATCCAAGGCTTCCTCCTGTGAAAATAAAGTCCGAAGATAAGCCGTTGACTATTAATTGGAGCGAGAAGTTTGAATCTGATGGATTGGCTGCAAAGCTCGCTAGTGTTGACAGCAGCTTACTTATCGGATCATATCTGGATGTACCTATTGGACAAGAAATAAAAAATGCTGGTATGAGGAAGGCTACAGGGGGCAGTTGGCTGTCTGTTAGTCAAGGAATATCAGAAGATACCTCTGATCTTGTATCAGGTTTTGCTACAGTTGGTGATGGATTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGATGACGACGATGATGTTGGGTACATGAGGCAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCACGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGGGCACGGAAGCGTTCCAGATCCTCAGGAAAGAGGTCCTGCCAAAGATGAGGATGACGACCAATCTTTCGCTGAAGAGGATTCTTATTTCTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAGCAGGTCATAGGGTCAGATGATCCTATTGGTATAACGGTTACTAATATGTATGGAAGGGCTAATGGTAATGATTTAATGGCTCAATACGATGGAGAACTGATGGATGTAGAAGAACTGAATCTGATGCATGCGGAACCTGTCTGGCAGGGCTTTGTTCCTCAGACAAATGACCTTATCATGTTGGGAGATGGAAAAGTTCTGAATCATAGTGGAAGATCACGACTCGAGGAAATGGAAGATGATCAACACGGTTCAGTTAGGTCAATCGGGGTGGGTTTCAACAGTGATGCTGCCGATATCGGCAGTGAAGTGCATGGAAGTTTTATTGGTGGTAGTAGTGAAGGGGATTTAGAATATTTCCGTGATCGTGATAGTGGACTTGGGGGATCCAAACACACTCATCATGATTTCGGTAAGAATTCTATGGACAAATCATTTAAAAATAAGAAGAAAAATGACGAGATTGAGTCGAATAAATATGTCATTGGAGGTCATAAAGATGCACACTCGCAAAGAAAAACACATACTGATGGCAACTTTTCATTTCCTCAATCTCAAGATAGCCAGATGATTCAGGGTGGTTCCAGTAGGTCGCCATGGTTAAATAATTGTAATGCGGATGAAACAGATGACTGTATGAATGCTTTTGAGGGATCTGATGAAATGCTTTCTTCGTGGAGGCAGAAGAGTAGTGATTCTTCGCCCGAGAAAAGTTCTAGGGATGAGAATAATGCTAATGCGATTAGATCCTCAAACTCTTCTCCAACTACTGTCGATAATTACGGTTACGCTGATAAAGAGCATGTCAAGCTAGAAAAGGATGATGAAGAGGTTGACATTACAAGGGAAGATGATTTAGGTGTTTCACAAGAGGATGAAGAGATTGCTGCTGTGCAAGAGCAGGTTAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACATTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTTCATGTTGTTTTAAATTCTGTAATAGCTGGCCGCTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGTAAAGCTATACAAGCTCATGACCTGCACACAGGCGTGGATGTTTGTATTAAAATTATAAAGAACAACAAAGATTTCTTTGATCAAAGCCTAGATGAGATCAAACTCCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTTTGCGGTTATATGATTATTTCTATTATAGAGAACATTTGTTAATAGTATGTGAGCTACTCAAAGCCAACTTATATGAGTTTCATAAATTTAACAGAGAATCAGGAGGGGAAGTTTACTTCACAATGCCAAGATTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAGTATTTACATAACCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTATAGCCGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCATATGTTCAGTCTAGGTCCTATCGTGCTCCCGAGGTTATTCTCGGGCTTTCATATGACAAGAAGATTGATATCTGGTCCCTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCTTATTTCAAAATGATTCTCCGGCAACATTACTTGCTAGGGTAATTGGGATCATCGGTCCAATTGGTCAAAGTTTGCTAGCAAAAGGACGAGATACTTATAAGTACTTCACAAAAAATCATATGCTTTATGAGAGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAAAAGACATCTTTGAGGCATAGATTACCGATGGGGGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGGTTAACCCGAAAAAGCGACCTTCTGCATCTGAGGCTCTAAAGCACCCATGGTTATCATACCCTTACGAACCGATATCATCTTGA 3528 0.4067 MAETNSVEVILEFLRRNRFTRAEAALRSELNNCSDVDVNGILQKLTLDEKNFCDLSQNDKGKLVVENRGLDSRDSVEVSKELIVKEIECGTGKNTTESKWKNATPAEERNKSNEVVGTSGTNFTFLKSSEDSVFDLHSWKINGPAELYQNDGGSKASNTSKASISQQSKAQTSEASISQQSKTQMSEAFDAANSNVKTAEENNVPAEKKPLWLGSSGKASTEPKFNLVQNKESREIDRQQLKFSNSSLKENLADNVLSRADENENSSSDVWKDCSIKTVFPFSKGDVSTSYNTSTYSEKADEKRKPEIGDARAYIKEQVDEVGRALALEKQKEEYPRLPPVKIKSEDKPLTINWSEKFESDGLAAKLASVDSSLLIGSYLDVPIGQEIKNAGMRKATGGSWLSVSQGISEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGEQYLQAKNVEQVIGSDDPIGITVTNMYGRANGNDLMAQYDGELMDVEELNLMHAEPVWQGFVPQTNDLIMLGDGKVLNHSGRSRLEEMEDDQHGSVRSIGVGFNSDAADIGSEVHGSFIGGSSEGDLEYFRDRDSGLGGSKHTHHDFGKNSMDKSFKNKKKNDEIESNKYVIGGHKDAHSQRKTHTDGNFSFPQSQDSQMIQGGSSRSPWLNNCNADETDDCMNAFEGSDEMLSSWRQKSSDSSPEKSSRDENNANAIRSSNSSPTTVDNYGYADKEHVKLEKDDEEVDITREDDLGVSQEDEEIAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIGQSLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3488 1175 Gene3D Phosphorylase Kinase; domain 1 858 945 - -
Mal6g3488 1175 ProSitePatterns Serine/Threonine protein kinases active-site signature. 990 1002 IPR008271 GO:0004672|GO:0006468
Mal6g3488 1175 MobiDBLite consensus disorder prediction 648 692 - -
Mal6g3488 1175 Coils Coil 182 202 - -
Mal6g3488 1175 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1173 - -
Mal6g3488 1175 ProSiteProfiles Protein kinase domain profile. 864 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3488 1175 Coils Coil 806 836 - -
Mal6g3488 1175 MobiDBLite consensus disorder prediction 94 118 - -
Mal6g3488 1175 CDD PKc_DYRK_like 864 1166 - -
Mal6g3488 1175 SMART serkin_6 864 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3488 1175 SUPERFAMILY Protein kinase-like (PK-like) 853 1168 IPR011009 -
Mal6g3488 1175 MobiDBLite consensus disorder prediction 151 201 - -
Mal6g3488 1175 MobiDBLite consensus disorder prediction 648 723 - -
Mal6g3488 1175 MobiDBLite consensus disorder prediction 471 501 - -
Mal6g3488 1175 MobiDBLite consensus disorder prediction 762 778 - -
Mal6g3488 1175 MobiDBLite consensus disorder prediction 693 723 - -
Mal6g3488 1175 MobiDBLite consensus disorder prediction 739 788 - -
Mal6g3488 1175 Gene3D Transferase(Phosphotransferase) domain 1 918 1166 - -
Mal6g3488 1175 MobiDBLite consensus disorder prediction 150 219 - -
Mal6g3488 1175 PANTHER - 2 1173 - -
Mal6g3488 1175 Pfam Protein kinase domain 864 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3488 Mal-Chr6 102599416 102610286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3488 863 1161 MAP Kinase Gene Family AT5G19010 31.975 1.10e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mal6g3488 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3488 - - gmx:100786225 1900.95