Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3480 ATGGCTTTGCAATCATCTTCTTCCTCCCCTTCTTCCATATCTTATAATTTCAGCTTCGATGTGTTCATTAGTTTTAGGGGGGCTGACACTCGATCCGGCATCACCGGTAATCTCTATAAAGCTCTTTCTGACAAAGGAATCCACACCTTCATTGATAACAAGGAGCTTCAGAGAGGTGATGAAATCACACCTTCGCTCCTCAAAAGCATTGAAGATTCAAGGATTGCCATTATTGTCTTCTCGAAGAACTATGCCTCTTCTTCATTTTGCTTGGATGAACTTGTCCACATCATTCACTTGCGCAAGACAAAGGGTCTCCTCGTTTTGCCTGTTTTTTTTGGTGTGGATCCTACTGATGTGCGGCATCAGAGTGGGAGTTATGCTGATCATCTCACTAAGCATGAAGAGAGGTTCCAAAATAACAAAAAAAAAATGGACCGATGGCATCAATGGAAGATGGCTTTAGCCGAAGCTGCTAACTTGTCCGGATACCATTATAGTCCTCCTGGATATGAATACAAGTTTATTGAGAAGATAGTCGAAGACATCTCAAGCAAGACCAATCGTGATTTTTTACATGTTGCCAAATACCCCGTTGGATTACAGTCCCAAGTACAACAAGTGAAATTTCTTCTTGATGAGCGATCTGAGGATGAGGTCCACATGGTAGGACTTTATGGGGCTAGAGGCATTGGTAAATCAACACTTGCAAAAGCTATTTTTAATTTCATTGCTAATCAATTTGAAGATGTATGTTTTCTAGAAGATGTGAGAGAGAATTCAACTTTAAATAACTTGAAACATCTCCAGGAAAAACTCCTTTTGAAAACGGTTAGATCAGACATTAAGTTAGGAGGTGTTAGTGAGGGAATTACAATCATAAAACAAAGATTAGTTAGAAAAAAGATTCTTTTGATTCTTGATGATGTTGACAAACTGGAGCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTCGGTCGTGGAAGTAGAGTCATCATTACCACTCGAGACAAACACTTACTAACCTATCATGGGATAGAAAGTATGCATCCAGTACAAAGGCTATATGGGGAAGAAGCTCTTGAATTGTTTAGTTTGATGGCTTTTAAAAATGTCAAAGTTCCTTCAAGTTATGAAGACATTTTATTTCGTGCTCATACTTATGCTTCTGGCCTTCCATTAGCTATAGTAATTATGAGGTCTAATTTGTTTGGAAGAAGCGTAGAAGATTGGGAGCGCACATTAGATGAGTATGAAAAGATTCCTAATAATGAGATCCAAAGGATACTTAAAGTCAGCTATGATGCTTTGGAGGAAAAGGAGAAGAGTGTCTTTCTAGACATTGTTTGTTGCAGCAAAGGGTGTCAATGGTCAGAGCTCAAAGAAATGCTTAATGCTCATTATGGGCATTGCATAAAATATCATGTTGAAGTGTTGGCTGAAAGATCTCTCATAGACCATTGGAAATTATATGATGTGAGATTACATGACTTGATAAAGGATATGGGTAAAGAAATCATTCGACAAGAATCACCCAACAAGCCTGGAGAACGCAGTAGGTTGTGGTTCCATGATGATATAGTTCATGTTTTAAAAGAAAATAAGGGAACAGGGAGTATTGCAATGATATATTGGAATTGTCCTTCAATGAAAAATGTAATAGAGTGGAATGGAAAGGCCTTCAAGAAAATGACAAATCTCAAAACATTGATCATTGAAAATGGCCATTTTTCTAAAGGCCCCAAGTATCTTCCAAGTAGTTTGAGAGTATTGAAGTTGAAAGAATGTACTTCGGAGTCTCCGTCATCTGGTATTTTTAGCAAGAAGTTCCAGGATATGAAAGTCTTGACATTGGACCATTGTCAGTATTTAACCCATATACCCAATGTCTCAGGTTTTCCAAATTTAAAAAAGTTTTCATTTAAAAATTGTAAAAATTTAATTACAATTAACGATTCAATTGGGAACCTTAATAAACTTGAAATCTTAGATGTAACCGGTTGCAACAAGATCGAGAGTGTTCCACCCTTAAGGCTGCTCTCTCTTAAGAAATTGCACCTCTCTAATTGTAGGAGTCTCAAGAGTTTCCCAGAATTATTATGCAAGATGACAAATATAAAAGAGATTGCGTTGTGGGGAACTTCCATAGGAGAATTGCCATTTTCATTTCAATATCTCAGTGAACTTCGTGGCTTACACATACATGAAGCTGGAATGTTTAGGTTCCCAAAACATAATGATAAAATATACTCTATAGTGTTTTCAAATTTGGAATCTCTTGATCTTGCAAAATGCAATCTCTCAGATGAATGTCTCCCAATAATTCTCAAGTGTTTTGCTAATGTTACATTGCTAGACTTATCGCATAACAATTTCAAAATTCTTCCCAAGTGCCTTAGTGAGTGTCACCTTCTTAAGAATCTTCATTTGGATTATTGCAAGTCTCTTAAGGAAATTACAGGGTTTCCACCAAATCTTGAAGCGCTTTCTGCAGTAGGAAGTGAATCATTAAATTCCTCAAGTAGAAGAATGTTAATGAGTCAGAAACTACATGAGGCTGGAGGCACCTATTTTTTTCTCCCAAACAAAACAGAGCCGATTGGGATTTCAGATTGGTTCGAGCACCAAATCAGGGGAAACACAATTTCTTTCTGGTTTCGTAAGAAGATCCCTTCTATTACTTCTATTATTCTTTTTCCGATAACTGAGGCTGTAGAAGGCTATTTGGTTATCAATGGCTATGAAGCTACTCTGGAATATTGGGGGTCCAAAGAGGCATATTTGTTTGATCTTGAATTGGAAGAAAGGATTGAACGCTATAAACCAGTTCACACGAATCTAGTGTGGAAGAAAGGATTGGATACCACTGTAGGGATTTTAAGAGGGTTTTTCAAAATTTTCAATCCTCTTTAG 2916 0.3741 MALQSSSSSPSSISYNFSFDVFISFRGADTRSGITGNLYKALSDKGIHTFIDNKELQRGDEITPSLLKSIEDSRIAIIVFSKNYASSSFCLDELVHIIHLRKTKGLLVLPVFFGVDPTDVRHQSGSYADHLTKHEERFQNNKKKMDRWHQWKMALAEAANLSGYHYSPPGYEYKFIEKIVEDISSKTNRDFLHVAKYPVGLQSQVQQVKFLLDERSEDEVHMVGLYGARGIGKSTLAKAIFNFIANQFEDVCFLEDVRENSTLNNLKHLQEKLLLKTVRSDIKLGGVSEGITIIKQRLVRKKILLILDDVDKLEQLEALAGGLDWFGRGSRVIITTRDKHLLTYHGIESMHPVQRLYGEEALELFSLMAFKNVKVPSSYEDILFRAHTYASGLPLAIVIMRSNLFGRSVEDWERTLDEYEKIPNNEIQRILKVSYDALEEKEKSVFLDIVCCSKGCQWSELKEMLNAHYGHCIKYHVEVLAERSLIDHWKLYDVRLHDLIKDMGKEIIRQESPNKPGERSRLWFHDDIVHVLKENKGTGSIAMIYWNCPSMKNVIEWNGKAFKKMTNLKTLIIENGHFSKGPKYLPSSLRVLKLKECTSESPSSGIFSKKFQDMKVLTLDHCQYLTHIPNVSGFPNLKKFSFKNCKNLITINDSIGNLNKLEILDVTGCNKIESVPPLRLLSLKKLHLSNCRSLKSFPELLCKMTNIKEIALWGTSIGELPFSFQYLSELRGLHIHEAGMFRFPKHNDKIYSIVFSNLESLDLAKCNLSDECLPIILKCFANVTLLDLSHNNFKILPKCLSECHLLKNLHLDYCKSLKEITGFPPNLEALSAVGSESLNSSSRRMLMSQKLHEAGGTYFFLPNKTEPIGISDWFEHQIRGNTISFWFRKKIPSITSIILFPITEAVEGYLVINGYEATLEYWGSKEAYLFDLELEERIERYKPVHTNLVWKKGLDTTVGILRGFFKIFNPL* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3480 971 CDD AAA 199 338 - -
Mal6g3480 971 Pfam TIR domain 19 188 IPR000157 GO:0007165
Mal6g3480 971 PRINTS Disease resistance protein signature 656 672 - -
Mal6g3480 971 PRINTS Disease resistance protein signature 297 311 - -
Mal6g3480 971 PRINTS Disease resistance protein signature 222 237 - -
Mal6g3480 971 PRINTS Disease resistance protein signature 390 404 - -
Mal6g3480 971 SMART AAA_5 219 356 IPR003593 -
Mal6g3480 971 SMART till_3 18 161 IPR000157 GO:0007165
Mal6g3480 971 Gene3D - 17 188 IPR035897 -
Mal6g3480 971 PANTHER ARCHAEAL ATPASE 29 897 - -
Mal6g3480 971 Gene3D Ribonuclease Inhibitor 679 849 IPR032675 -
Mal6g3480 971 Gene3D Ribonuclease Inhibitor 543 678 IPR032675 -
Mal6g3480 971 Pfam NB-ARC domain 203 437 IPR002182 GO:0043531
Mal6g3480 971 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 164 IPR035897 -
Mal6g3480 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 449 IPR027417 -
Mal6g3480 971 Gene3D - 189 348 IPR027417 -
Mal6g3480 971 Gene3D - 356 439 IPR042197 -
Mal6g3480 971 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 897 IPR044974 GO:0006952
Mal6g3480 971 SUPERFAMILY L domain-like 511 841 - -
Mal6g3480 971 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3480 Mal-Chr6 102401801 102405643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3480 19 837 WRKY Transcription Factor Family AT4G12020 27.179 5.83e-68 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3480 - - mtr:MTR_6g071935 1161.36