Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3477 ATGGCTATGCACTCACCTTCCTCTTCATTTTCTTATGGATTCACCTACCATGTGTTCCTAAGTTTCAGGGGCCCTGACACTCGGTACAGTTTTACCGGAAATCTCTACAAGGCTCTTATTGACAAGGGAATCCACACCTTCATTGATGACAATGATCTTGAAAGAGGAGATGAAATCACACCATCTCTCATCAAGGCGATTGAAGAATCTAGGATTTTTATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGATGAACTTGTCCACATCATTCACTGCTACACGACAAAGGGTTGCCTTGTTTTGCCTGTTTTCTTTGGTGTGGATCCTTCTGATGTGCGACATCATACAGGTAGTTATGGTGAAGATCTGACTAAGCATGAAGAGAGGTTCCAAAGTAACAAGGATAACATGAAGAGGTTGCAAAAATGGAAGATAGCTATTAATCGAGCAGCTAACTTGTCCGGCTACCATTTCACTCCTGGATATGAATACAACTTTATTGGGGAGATAGTCAAATACATCTCGGACAAGATCAATCGTGTACCTTTACATGTTGCAGAGTACCCTGTTGGATTAGAGTCCCGAGTGCAACACGTGAAAAGGCTTCTTGATCAAGGATCTGATGATGCGGTCCACATGGTAGGACTTTATGGTACTGGAGGCTCGGGTAAATCAACACTTGCAAAAGAAATTTATAATTTTATAGGTGATCAATTTGAAGGTGTATGTTTTCTTCATAATGTGAGAGAGAATTCAGCTAAAAATAGCTTGAAACATCTCCAGGAGGAGTTTCTTTTGAAAACAATTGGATTGAACATTAAAATAGGAGATGTTAGTGAGGGAGTTCCAATCATAAAGGAAAGGCTATGTAGAAAGAAGATTCTTTTGATTCTCGATGATGTTGACAATGTGAAACAACTGCAAGTTTTGGCTGGAGGAGTTGATTGGTTCGGTCCTGGAAGCAGAGTCATCATTACTACTCGAGACAAACACTTACTAATTAGTCATGAGATAGAAAGAACATATGCTATACAAGGGTTGCATGAGACAGAAGCTCTTGAATTGTTGAGGTGGACGTCTTTTAAAAATAATGAAGTTCCTTCAAGTTATGAAGACATTTTAAATCGTGTAGTTACATATGCTAATGGCCTACCGTTAGTTATTGAAATAGTGGGTTCCAACTTGTTTGGAAAGAGAATAGAAGAATGGAAGTATACGTTAGACGGGTATGAAAACATTCCCAATAATAAGATCCAAGAGATACTTAAAGTAAGCTATGATGATTTGCAAGAAGAGGAGCAAAGTGTGTTTCTGGATATTGCTTGTTGCTTCAAAGGGTGTAAATGGGTGGAAGTCGGAGATATACTTCATGCTTATTATGGTCATTGCATAAAACATCATGTTAGAGTTTTAGCTGAAAAATCTCTCATATACCATTGGAAATATGATGGTGATGTGACCTTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAACAATCACTTAAAGAGCCTGGAGAACGCAGTAGGTTGTGGTGTCATGATGATATAGTTCACGTTTTACAGGAAAACACGGGAACTAGTAAAATTGAAATGATATATCTGAACTGCCCCACGGAAGCTGTAATAAGCTGGAATGGAAAGGCCTTCAAGAAGATGATAAATCTCAAAACACTAATCATAAAAGGTGGTCATTTTTCCAAAGGCTCCCGACATTTTCCAAGTAGTCTGAGAATATTAGAATGGCAAAGATATCCTTTACAGTGTATATCATTTAGCATTTCGAACAAGAGGGATTCCTCCAAATCTAAAACAATTGTCTACATTGGCATGCGGATCATTGACTTCGTCAAGTAA 1881 0.3849 MAMHSPSSSFSYGFTYHVFLSFRGPDTRYSFTGNLYKALIDKGIHTFIDDNDLERGDEITPSLIKAIEESRIFIPVFSINYASSSFCLDELVHIIHCYTTKGCLVLPVFFGVDPSDVRHHTGSYGEDLTKHEERFQSNKDNMKRLQKWKIAINRAANLSGYHFTPGYEYNFIGEIVKYISDKINRVPLHVAEYPVGLESRVQHVKRLLDQGSDDAVHMVGLYGTGGSGKSTLAKEIYNFIGDQFEGVCFLHNVRENSAKNSLKHLQEEFLLKTIGLNIKIGDVSEGVPIIKERLCRKKILLILDDVDNVKQLQVLAGGVDWFGPGSRVIITTRDKHLLISHEIERTYAIQGLHETEALELLRWTSFKNNEVPSSYEDILNRVVTYANGLPLVIEIVGSNLFGKRIEEWKYTLDGYENIPNNKIQEILKVSYDDLQEEEQSVFLDIACCFKGCKWVEVGDILHAYYGHCIKHHVRVLAEKSLIYHWKYDGDVTLHDLIEDMGKEVVRQQSLKEPGERSRLWCHDDIVHVLQENTGTSKIEMIYLNCPTEAVISWNGKAFKKMINLKTLIIKGGHFSKGSRHFPSSLRILEWQRYPLQCISFSISNKRDSSKSKTIVYIGMRIIDFVK* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3477 626 CDD AAA 195 334 - -
Mal6g3477 626 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 161 IPR035897 -
Mal6g3477 626 SMART AAA_5 215 352 IPR003593 -
Mal6g3477 626 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Mal6g3477 626 SMART till_3 15 158 IPR000157 GO:0007165
Mal6g3477 626 Gene3D - 14 182 IPR035897 -
Mal6g3477 626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 605 IPR044974 GO:0006952
Mal6g3477 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 445 IPR027417 -
Mal6g3477 626 PRINTS Disease resistance protein signature 293 307 - -
Mal6g3477 626 PRINTS Disease resistance protein signature 386 400 - -
Mal6g3477 626 PRINTS Disease resistance protein signature 218 233 - -
Mal6g3477 626 PANTHER ARCHAEAL ATPASE 26 605 - -
Mal6g3477 626 Pfam NB-ARC domain 198 432 IPR002182 GO:0043531
Mal6g3477 626 Gene3D - 183 345 IPR027417 -
Mal6g3477 626 Gene3D - 351 435 IPR042197 -
Mal6g3477 626 SUPERFAMILY "Winged helix" DNA-binding domain 421 530 IPR036390 -
Mal6g3477 626 Pfam TIR domain 16 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3477 Mal-Chr6 102192681 102234853 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3477 5 604 WRKY Transcription Factor Family AT4G12020 28.846 1.68e-60 217