Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3470 ATGAAGAAGATTCGCAAGAACTCGAGTAGTAGCAATGGTGATTCAAACTCTTCATCATCATCATTTCTTGTTCGACACGCAACCCTAATCTTACCATATCTAACCCACCAACAACTCGCTAACATCTCTCTAACCTGCAAATCACTCCACAAACTCACTCAATCCATCACTCTCCGTCGCATCTCCGACGCTTCCAGAACCTTCGAGAAAAACAATCATCCAATCCCATTTCACAACCCCATCAGCCATAACAACCCTCCTTACTCCTACTTTCTCTACACTCCTTCCCTCATTCTTTCTCACAACACCCCTTGTTATCAACCATGGGGTAGCAAGGGTAGTCATGTCATTTCAGATGATGGGTCGGTGAGATTTGGTGTTGGATGTGATTTTGAAGGTGTTTGTGATAATGGGTCAGTGGGAGATGGTAGGGGTAGTTCAGTAATTTCACCGCCACCAGCAGCAGCAGCCATTTGTAATGATGAGTCAGTGAGTTTTGGTGTTGGATGTGTTTGTGATGATGGGTTGGTGGGAAATGGTAGGGGTAGTTCAATAATTTCACAACCACCACCACCACCACCCATTGATGATGATGGGTCAATGAGTTCTGGTGTTGGATGTGATTTTGAAGGTGTTTGTGATGATGGGTTGGTGGGAGATGGTAGGGTTAGTTCAGTAATTTCACCACCACCCATTGATGATGATGGGTCAGTGAGTTTTGGTGTTGGATGTAATTTTGAAGGTGTTTGTGAAAATGGGTCAGTAGGTGGTGGTGGGGGTAGTTATGTCATTTCACAAATTCCGCCGGTTGATGATGGTAGGCCGGTGAGTTTCGGTGTTGGATGTGAGTTTGAAGGTGTTTGTGATGATGGAGTAATTTCACCAATTCCGCCTAGAACGGTTGATGATGATGAGTCAGTGAGTTTTGGTGTCGGATGTGAGTGTGAAGGTGTTTGTGATGATGGATGTATGTGTTTTGATGATGGGGTTGATGATATTGGAAGAGAGTGTGGGTTGGGTTGTTTTTGTGGGAGTGAGTGTGGGAACAGGGTGAGTCAAAATGGGGTTAATGTTAGGGTTAAGATTGTTTGGTGTGGTGGAGGGAAAGGGTGGGGTTTGTTTTCTGATCAGTTTGTTGCTAAAGGGGAGTTTTTGTTTCAATATGCAGGTGAACTATTGACAACCAAGGAAGCACAGAGGAGACAACAACATTATGACGAACTGGCATCACGTGGTCGTTTCTCGTCTGCTCTTTTAGTAGTAAGGGAACATCTTCCATCAGGAAAGGCATGTTTGAGATTGAACATAGACGCAACAAGAATAGGAAACGTTGCCCGGTTTGTAAATCATTCATGCGATGGTGGTAATTTAAGCACAAAGCTAGTCAGAAGTACAGGAGCTTTGTTCCCCCGACTTTGCTTCTTTGCTTCGAAAGATATCCAAGAAGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGTCCAACGGGCGGCCGTGTCACTGCAACAGCCCTTCTTGCTTTGGAACATTGCCCTCAGAAGACACTTGA 1557 0.4451 MKKIRKNSSSSNGDSNSSSSSFLVRHATLILPYLTHQQLANISLTCKSLHKLTQSITLRRISDASRTFEKNNHPIPFHNPISHNNPPYSYFLYTPSLILSHNTPCYQPWGSKGSHVISDDGSVRFGVGCDFEGVCDNGSVGDGRGSSVISPPPAAAAICNDESVSFGVGCVCDDGLVGNGRGSSIISQPPPPPPIDDDGSMSSGVGCDFEGVCDDGLVGDGRVSSVISPPPIDDDGSVSFGVGCNFEGVCENGSVGGGGGSYVISQIPPVDDGRPVSFGVGCEFEGVCDDGVISPIPPRTVDDDESVSFGVGCECEGVCDDGCMCFDDGVDDIGRECGLGCFCGSECGNRVSQNGVNVRVKIVWCGGGKGWGLFSDQFVAKGEFLFQYAGELLTTKEAQRRQQHYDELASRGRFSSALLVVREHLPSGKACLRLNIDATRIGNVARFVNHSCDGGNLSTKLVRSTGALFPRLCFFASKDIQEDEELTFSYGEIRKRSNGRPCHCNSPSCFGTLPSEDT* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3470 518 ProSiteProfiles Post-SET domain profile. 498 514 IPR003616 -
Mal6g3470 518 ProSiteProfiles SET domain profile. 358 491 IPR001214 GO:0005515
Mal6g3470 518 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 22 507 - -
Mal6g3470 518 MobiDBLite consensus disorder prediction 1 20 - -
Mal6g3470 518 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 22 507 - -
Mal6g3470 518 Gene3D SET domain 292 518 IPR046341 -
Mal6g3470 518 SMART set_7 358 497 IPR001214 GO:0005515
Mal6g3470 518 Pfam SET domain 370 491 IPR001214 GO:0005515
Mal6g3470 518 SUPERFAMILY SET domain 306 511 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3470 Mal-Chr6 101904603 101907685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3470 336 513 C2H2 Transcription Factor Family AT2G23740 34.054 3.94e-21 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal6g3470 SET 9.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3470 K11433 - gmx:100786871 342.043