Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3469 ATGGCCGAGTCACAGGGTGGTTTTGGTAGTTCCGGAACCAGGCGTAGTATAGGCGCCAGTGCTGCAAAGTGGACCATAGCAGGAGCAACACAAGAGGTATCGGTGCCGTGTGGAGCTTGCAAGCACTTGAAGAGGAAGTGTATTGATGGCTGCATCTTTGCACCCTACTTTGGTACAGACCAAGGTGCAGCTAACTTTGCGGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGACGAAGCTCTTGTCCAATATTTTACCTAACCAACGCCAAGAAGCAATGGAGACTATAATCTATGAGGCTCAGGCGAGGATATCTAATCCAGTTTCTGGTTGTGTGTCCACCATTATTGAATTGCAGGAACAGGTGGAAGCAATGCAAGCAGAGATGTCAATGATGAAAACTCAGCTGATGAACAACAGATTTGCATATGAGAATGCTCTTCAAACCACACACCAGCAGCATCAGCAAATGCTACAGCAACCAAACTTCAATGTATCTGTGCAACCAGCATACTCCAACTCAACTGCTTCCATGAACAACTTCAACCCAGGTTTTGACTTCACAATACATACAGCTTCCAACAACCCCATGAACATGAACAACTTCAACCCTGGTTTTGATCCCACAATGGAGACAGCACCCTCATCACAGAGCTTAGAGCCTTTTCAAAACTCCAGGTTCTCTTATTATCCGGAAGATGATTAA 708 0.459 MAESQGGFGSSGTRRSIGASAAKWTIAGATQEVSVPCGACKHLKRKCIDGCIFAPYFGTDQGAANFAAVHKVFGASNVTKLLSNILPNQRQEAMETIIYEAQARISNPVSGCVSTIIELQEQVEAMQAEMSMMKTQLMNNRFAYENALQTTHQQHQQMLQQPNFNVSVQPAYSNSTASMNNFNPGFDFTIHTASNNPMNMNNFNPGFDPTMETAPSSQSLEPFQNSRFSYYPEDD* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3469 235 MobiDBLite consensus disorder prediction 208 226 - -
Mal6g3469 235 ProSiteProfiles LOB domain profile. 35 137 IPR004883 -
Mal6g3469 235 PANTHER LOB DOMAIN CONTAINING PROTEIN 27 226 - -
Mal6g3469 235 Pfam Lateral organ boundaries (LOB) domain 36 134 IPR004883 -
Mal6g3469 235 Coils Coil 116 136 - -
Mal6g3469 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 27 226 - -
Mal6g3469 235 MobiDBLite consensus disorder prediction 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3469 Mal-Chr6 101902296 101903820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3469 1 235 AS2 family AT3G03760 41.860 9.39e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g3469 LOB 2.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3469 - - mtr:MTR_6g027700 263.462