Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3468 ATGGCTGAGTCACAAAGTGGTGATGGTAGTTCGGGAAACAGGCGCAATAAAAGCGCAAATGCCGCAAAGCGTGCAATGGCTGGAGCGGCGCAAGATGTACCGGTTATATCGCCGTGTGGTGCGTGCAAGTTCTTGAGGAGGAAGTGTAGTAGTGGATGCATCTTTGCACCCTACTTTGGTACAGACCAAGGTGCGGCTAGGTTTGCGGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAGCTCTTGTCAAGTATTCCAGCTGACCATCGCCATGAAGCTGCAGCGACTATTTGCTATGAGGCTCAGGCTAGGCTATCTGATCCGGTTTATGGTTGTGTGTCCACCATTCTTGCTTTGCAGCAACAGGTGGCAGCAATGCAAGCAGAGGTCTCAATGATGCAAACTCAAGTGATGAATAGGAGGTATGCATATGCTGGTACTCTTCAAACCACACATCAGCAGCCGCATCAAATGCTACAGCAACCAAACTTCAATGTATCTGTGCAACCAGCATACTCCAACAATTCATCGGCTTCGACCACCAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGGCCTCACAATGGAGACAGCACCTTCGTCACAGAGCTTGGAGCCTTTTCAGAACTCAAGGTTGTCTCATTATGAGGAAGATGATTAA 672 0.4851 MAESQSGDGSSGNRRNKSANAAKRAMAGAAQDVPVISPCGACKFLRRKCSSGCIFAPYFGTDQGAARFAAVHKVFGASNVSKLLSSIPADHRHEAAATICYEAQARLSDPVYGCVSTILALQQQVAAMQAEVSMMQTQVMNRRYAYAGTLQTTHQQPHQMLQQPNFNVSVQPAYSNNSSASTTNLMNMNNFNPGFGLTMETAPSSQSLEPFQNSRLSHYEEDD* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3468 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 15 209 - -
Mal6g3468 223 MobiDBLite consensus disorder prediction 196 214 - -
Mal6g3468 223 ProSiteProfiles LOB domain profile. 37 139 IPR004883 -
Mal6g3468 223 Coils Coil 118 138 - -
Mal6g3468 223 MobiDBLite consensus disorder prediction 196 223 - -
Mal6g3468 223 MobiDBLite consensus disorder prediction 1 23 - -
Mal6g3468 223 MobiDBLite consensus disorder prediction 1 18 - -
Mal6g3468 223 PANTHER LOB DOMAIN CONTAINING PROTEIN 15 209 - -
Mal6g3468 223 Pfam Lateral organ boundaries (LOB) domain 38 136 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3468 Mal-Chr6 101898261 101899402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3468 1 223 AS2 family AT3G03760 50.800 5.50e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g3468 LOB 1.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3468 - - aprc:113866578 270.781