Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3444 ATGGCTCTGCTTCAAAAACCAAACCTCTCCTCTTCTTTCTCCTATGGATTCACCTATGATGTTTTCCTTAGTTTCAGAGGTTGTGATACTCGTTACGGTTTTACTGGAAATCTCTACAAAGCTCTATGTGATAGTGGAATCCACACTTTCATTGATGATAGAGAGCTTCACGGCGGTGATGAAATTAAACCATCACTTTTTAAGGCCATTGAAGACTCTAGAATTGCCATTCTTGTCTTCTCTATCAACTACGCCTCTTCTTCATTTTGTTTAGACGAACTTGTTCACATCACTCACTGCTTTAATGTCAATAATCGTCTGGTTTTGCCCGTTTTCTATGGCGTGGAACCTACTGTCTTGCGACATCAAAATGGGAGTTATGGTGAAGCAATAGCTAAGCATGGAGAAAGGTTCCAAAACAACCAAGAAAATATGGAGAGGTTGCAGAGATGGAAAATGGCTCTAAACCAAGCATCTAACTTGTCAGGCTACCATTGGACCAGTAATGAATATGAACACGATTTTATTGGGAAGATAGTGGAAATGATTTCTATAAAGATCAATCATGCTCCTTTACATGTTGTGGACTACCCGGTTGGAATGCAGTCTCGAGTGCTGCAAGTGAAATTGCTATTGGATATAGGATTTGATGATCGAGTCCTCATGGTAGGGATCGTTGGGACTGGAGGAATAGGTAAAACCACACTTGCACGAACAATTTATAATTTGATTGCCGGTCAATTTGAAGTTTTATGTTTTCTTCACAATGTAAGAAAGAATTCAGCTAAATATGGCTTAGAAAAACTCCAAGAGAAGATCCTCTCTAAAACAATTGGGTTAAACATTAACTTTGGAGATGTTGCCGAAGGAATTCCAATCATACAAAAAAGGCTACATCGGAAGAAGGTTTTGTTGATCCTCGACGATGTTGATGAATTGAAGCAACTGCATGTCATGGCTGGAGGACGTGACTGGTTCGGTCTTGGTAGTAGAGTAATCATTACGACTCGAGACAAACATTTACTAGCAAGTCACGGGATTGAAAGAACATATGAAGTAGATGAGTTGAATGGAGAAGAAGCTCTTGAATTGTTAAAGTGGAAGGCTTTTAAAAATAGTACAATTGATTCAAGTTATGAGGATATGTTAAACCGGGCTGTAGCTTATGCTTCTGGCCTTCCATTAGCTTTAGACGTAATAGGTTCTAACTTGTTTGGAAAGCAAATAGAAGAATGGAAATCTGCATTGGATCAATATGAAAGGATTCCTAATAAAGAGATCCAAAACATACTTAAAGTAAGCTTTGATGCTTTGCAGGAAGAAGAGCAAAGTGTTTTTCTTGACATTGCTTGTTGCTTCGATGGCTATGAACTAGCCGATGTCGAAGATATACTTTGTGCTCATTATGGTCAATGCATGAAATATCATATTGGAGTTTTGGTTGAAAAATCTCTCATAAAGATAAAGATAAGACCGTTGGGTTGGGGCCATGATTGTGTGAAATTACATGACTTGATAGAAAATATGGGTAAAGCAATTGTAAAACAAGAATCACCAAAGGATCCAGGAAAGCGCAGTAGGTTGTGGTTTCACAAAGATATAGTTCAAATTTTACAAGAAAATACGGTAAGATTAATATTTTATTTTATTTTTGTTTTTTTATCTTTAATAGTGATTTATCATTTTGCTCTATTTTATGATCATGCTATGTTCTTTTTTCTCTTGCTAATTTGTAAATTTCTCTCTATATAA 1752 0.3676 MALLQKPNLSSSFSYGFTYDVFLSFRGCDTRYGFTGNLYKALCDSGIHTFIDDRELHGGDEIKPSLFKAIEDSRIAILVFSINYASSSFCLDELVHITHCFNVNNRLVLPVFYGVEPTVLRHQNGSYGEAIAKHGERFQNNQENMERLQRWKMALNQASNLSGYHWTSNEYEHDFIGKIVEMISIKINHAPLHVVDYPVGMQSRVLQVKLLLDIGFDDRVLMVGIVGTGGIGKTTLARTIYNLIAGQFEVLCFLHNVRKNSAKYGLEKLQEKILSKTIGLNINFGDVAEGIPIIQKRLHRKKVLLILDDVDELKQLHVMAGGRDWFGLGSRVIITTRDKHLLASHGIERTYEVDELNGEEALELLKWKAFKNSTIDSSYEDMLNRAVAYASGLPLALDVIGSNLFGKQIEEWKSALDQYERIPNKEIQNILKVSFDALQEEEQSVFLDIACCFDGYELADVEDILCAHYGQCMKYHIGVLVEKSLIKIKIRPLGWGHDCVKLHDLIENMGKAIVKQESPKDPGKRSRLWFHKDIVQILQENTVRLIFYFIFVFLSLIVIYHFALFYDHAMFFFLLLICKFLSI* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3444 583 ProSiteProfiles TIR domain profile. 17 187 IPR000157 GO:0007165
Mal6g3444 583 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 541 IPR044974 GO:0006952
Mal6g3444 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Mal6g3444 583 SUPERFAMILY "Winged helix" DNA-binding domain 425 539 IPR036390 -
Mal6g3444 583 Pfam NB-ARC domain 218 436 IPR002182 GO:0043531
Mal6g3444 583 SMART till_3 18 161 IPR000157 GO:0007165
Mal6g3444 583 Gene3D - 355 439 IPR042197 -
Mal6g3444 583 Pfam TIR domain 19 188 IPR000157 GO:0007165
Mal6g3444 583 Gene3D - 186 348 IPR027417 -
Mal6g3444 583 PRINTS Disease resistance protein signature 297 311 - -
Mal6g3444 583 PRINTS Disease resistance protein signature 390 404 - -
Mal6g3444 583 PRINTS Disease resistance protein signature 222 237 - -
Mal6g3444 583 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 164 IPR035897 -
Mal6g3444 583 PANTHER ARCHAEAL ATPASE 28 541 - -
Mal6g3444 583 SMART AAA_5 219 356 IPR003593 -
Mal6g3444 583 Gene3D - 18 185 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3444 Mal-Chr6 100284992 100286850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3444 199 540 WRKY Transcription Factor Family AT5G45050 32.471 1.15e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3444 - - mtr:MTR_6g477730 715.687