Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3439 ATGTCTATGCAATTACCTTCTTCTTCCTCTTCCTCCTCCTCAGATGGTTTCAAATTCGATGTGTTCATTAGTTTCAGAGGTCCCGACACTCGATATGGTTTCACTGGTAATCTCTATAAAGCTCTTTGTAACAAAGGAATCTACACCTTCATTGATGACGAGGAGCTTCAGAGAGGTGACGAAATCACACCTTCGCTCCTCAAGAGCATTGAAGACTCGAGGATTGCCGTTATCGTATTCTCTAAGAGCTATGCTTCTTCTTCATTTTGTTTAGACGAACTTGCCCACATCATTCACTACTTCAAGGCAAAAGGTCGCGTTGTTCTTCCAGTTTTCTATGATGTGGATCCTTCTCAGGTGCGACATCAGAATGATGGTTATGGTGAAGCACTTGCTAAGCATGAAGATAGGTTCCAAAATAATAAGAAAAACATGGAGCGGTTGCTGAAATGGAGGAAAGCTCTTAAACAAGCTGCGGACTTATCTGGCTACCATTTCAATCTTGGGAAGGAATATGAACACAATTTCATTGAAAAAATAGTTAAAGACGTTTCCAATAAGATCAATCATATTCCTTTACATGTTGCTGATTACCCTGTTGGACTCGAACCTCGAATGTTAGAGGTGAGCTTGCTTCTCGACTTAGGATCTAGTGATGGAGTGTGCATAATAGGGATCCATGGAACTGGAGGAATCGGTAAGACAACACTTGCTCGAGCAGTTTATAATTTGATTGCCAATCAATTTGAAGGGTTGTGTTTCCTTCACAATGTGAGAGAAAAATCAACTATACATGGTTTAGAACATCTCCAGGAGCAGCTCCTCTCCAAAACAATCGGAATGAACATTACGATAGGACATGCATCTGAGGGAATTCCATTCATAAAACAAAGACTATCCCAAAAGAAGGTTCTTTTGATTCTTGATGATGTTGACAAGCTAGAGCAGCTTCGATCTTTGGTTGGAGAGCCTAATTGGCTTGATCCTGGTAGCAAACATTTGATGGAAAGTCATGGGATGGAAGGTTGCTAA 1032 0.4079 MSMQLPSSSSSSSSDGFKFDVFISFRGPDTRYGFTGNLYKALCNKGIYTFIDDEELQRGDEITPSLLKSIEDSRIAVIVFSKSYASSSFCLDELAHIIHYFKAKGRVVLPVFYDVDPSQVRHQNDGYGEALAKHEDRFQNNKKNMERLLKWRKALKQAADLSGYHFNLGKEYEHNFIEKIVKDVSNKINHIPLHVADYPVGLEPRMLEVSLLLDLGSSDGVCIIGIHGTGGIGKTTLARAVYNLIANQFEGLCFLHNVREKSTIHGLEHLQEQLLSKTIGMNITIGHASEGIPFIKQRLSQKKVLLILDDVDKLEQLRSLVGEPNWLDPGSKHLMESHGMEGC* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3439 343 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 164 IPR035897 -
Mal6g3439 343 Pfam NB-ARC domain 219 318 IPR002182 GO:0043531
Mal6g3439 343 Gene3D - 190 340 IPR027417 -
Mal6g3439 343 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 332 IPR044974 GO:0006952
Mal6g3439 343 PANTHER ARCHAEAL ATPASE 28 332 - -
Mal6g3439 343 Pfam TIR domain 18 192 IPR000157 GO:0007165
Mal6g3439 343 PRINTS Disease resistance protein signature 298 312 - -
Mal6g3439 343 PRINTS Disease resistance protein signature 223 238 - -
Mal6g3439 343 SMART till_3 18 161 IPR000157 GO:0007165
Mal6g3439 343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 335 IPR027417 -
Mal6g3439 343 ProSiteProfiles TIR domain profile. 17 188 IPR000157 GO:0007165
Mal6g3439 343 Gene3D - 17 189 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3439 Mal-Chr6 100167063 100168333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3439 6 338 WRKY Transcription Factor Family AT4G12020 27.954 2.30e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3439 - - mtr:MTR_6g072460 440.269