Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3434 ATGATGTGTTCATTAGTTTCAGGGGTACCGACACTCGATCCGGTTTCACTGGTAATCTCTACAAAGCTCTTTGTGACAAAGGAATTCACACATTCATTGATGACATGCAAGGAGCTTCCGAGAGGTGACGAAATCACACCTTCACTCCTCAAGAGCATTGAAGACTCGAGGATTGCCATTATCATCTTCTCCAAGGACTATGCTTCTTCTTCATTTTGTTTAGACGAACTTGTCCACATCATTCACTACTTCAAGGCAAAAGGTCGCCTTGTTCTGCCAGTTTTCTATGATGTGGATCCTTCTCACGTGAGACATCAGAAAGCTAGTTACGGTGAAGCACTTGCTAAACATAGAAAGAGGTTCCCAAATAACAAAAAAAACATGGAGCGATGGCATCAATGGAAGATGGCTCTGGCCGATGCTGCTAACTTATCCGGTTACCATTATAGTCCTCCTGAATATGAATACAAGTTTATTGAGAAGATAGTCGAAGACATCTCCAACAAGATCAATCGTGTATTTTTACATGTTGCCAAATACCCTGTTGGATTAGAGTCCCGAGTACAACAAGTGAAATTTCTTCTTGATAAGGGATCTGAGGATGCGGTCCACATGGTAGGACTTTATGGTACTGGAGGCTTGGGTAAATCAACACTTGCAAAAGCAATTTATAATTTCATTGCTGATCAATTTGAAGGTTTATGTTTTCTAGAAGATGTGAGAGAGAATTCAACTCCAAATAACTTGAAACATCTCCAGGAAAAGCTCCTTTTGAAAACGGTTAGATCAGACATTAAGTTAGGAGGTGTTAGTGAGGGAATTACAATCATAAAACAAAGGCTACGTAGAAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAACTGGAGCAGCTAGAGGCTTTGGCTGGAGGACTTGATTGGTTTGGTCGTGGAAGTAGAGTCATTATTACCACTCGAGACAAACACTTACTAATCTGTCATGGGATAGAAAGTACGCATGCGGTAGAAGGAATGTATGGGACAGAAGCTCTAGAATTGTTGAGGTTAATGGCTTTTAAAAATGCCCAAGTTCCTTCAAGTTATGAAGACATTTTAATTCGTGCACTTACTTATGCTTCTGGCCTTCCATTAGCTATAGTAACAATAGGGTCGAATTTGTTTGGAAGGAGCGTAAAAGAATGGGAGCATTTATTAGATGAGTATGAAAAGATTCCCAATAAAGAGATCCAAAGGATACTAAGAGTTAGCTTTGATGGTTTGGAGGAAAAGGATCAGAGTATCTTTCTAGACATTGCTTGTTGCTTCAAATGGTGTAAATGGACAGAGGTCAAAGAAATACTTGATGCTCATTATGGCCATTGTATAAAATATCATGTTGGAGTGTTGGCTGAAAAATCTCTCATAAACCATTGGAAAGATGACACTTATGTGACAATACATGACTTGATAGAGGACATGGGTAAAGAAGTTGTCCGACAAGAATCACCCAACAAGCCTGGAGAACGCAGTAGGTTGTGGTTTCACGATGATATAGTTCAAGTTTTAAGAGAAAATATGGGATCTGGAAACATTGAAATGATATATTTGAATTGCCCCTCAATGGAAAATGTAATAAACTGGAATGGAAAGGCCTTTGAGAACATGACAAATCTCAAAACACTTATCATAAGAAATGGTAATTTTTCTAGAGGTCCTGAATATCTTCCAAGTAGTTTGAGATTTTTGGAATGGAAAGAATGTCCTTCGAAGTCTCTATCATCTTGTATTTTAAACAAGGAGTTCAACTATATGAAAGTCTTTGTAAGAAATGAATCCCTGCCTTTCATTGATCTGATTTTGCTATAA 1848 0.3826 MMCSLVSGVPTLDPVSLVISTKLFVTKEFTHSLMTCKELPRGDEITPSLLKSIEDSRIAIIIFSKDYASSSFCLDELVHIIHYFKAKGRLVLPVFYDVDPSHVRHQKASYGEALAKHRKRFPNNKKNMERWHQWKMALADAANLSGYHYSPPEYEYKFIEKIVEDISNKINRVFLHVAKYPVGLESRVQQVKFLLDKGSEDAVHMVGLYGTGGLGKSTLAKAIYNFIADQFEGLCFLEDVRENSTPNNLKHLQEKLLLKTVRSDIKLGGVSEGITIIKQRLRRKKILLILDDVDKLEQLEALAGGLDWFGRGSRVIITTRDKHLLICHGIESTHAVEGMYGTEALELLRLMAFKNAQVPSSYEDILIRALTYASGLPLAIVTIGSNLFGRSVKEWEHLLDEYEKIPNKEIQRILRVSFDGLEEKDQSIFLDIACCFKWCKWTEVKEILDAHYGHCIKYHVGVLAEKSLINHWKDDTYVTIHDLIEDMGKEVVRQESPNKPGERSRLWFHDDIVQVLRENMGSGNIEMIYLNCPSMENVINWNGKAFENMTNLKTLIIRNGNFSRGPEYLPSSLRFLEWKECPSKSLSSCILNKEFNYMKVFVRNESLPFIDLILL* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3434 615 Gene3D - 22 170 IPR035897 -
Mal6g3434 615 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 594 IPR044974 GO:0006952
Mal6g3434 615 SMART till_3 7 144 IPR000157 GO:0007165
Mal6g3434 615 Gene3D - 171 331 IPR027417 -
Mal6g3434 615 PRINTS Disease resistance protein signature 547 563 - -
Mal6g3434 615 PRINTS Disease resistance protein signature 205 220 - -
Mal6g3434 615 PRINTS Disease resistance protein signature 373 387 - -
Mal6g3434 615 PRINTS Disease resistance protein signature 280 294 - -
Mal6g3434 615 PANTHER ARCHAEAL ATPASE 35 594 - -
Mal6g3434 615 CDD AAA 182 321 - -
Mal6g3434 615 Pfam TIR domain 36 171 IPR000157 GO:0007165
Mal6g3434 615 SMART AAA_5 202 336 IPR003593 -
Mal6g3434 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 432 IPR027417 -
Mal6g3434 615 ProSiteProfiles TIR domain profile. 1 170 IPR000157 GO:0007165
Mal6g3434 615 Gene3D - 340 422 IPR042197 -
Mal6g3434 615 Gene3D Ribonuclease Inhibitor 493 608 IPR032675 -
Mal6g3434 615 Pfam NB-ARC domain 185 408 IPR002182 GO:0043531
Mal6g3434 615 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 147 IPR035897 -
Mal6g3434 615 SUPERFAMILY "Winged helix" DNA-binding domain 408 516 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3434 Mal-Chr6 100118515 100120868 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3434 50 596 WRKY Transcription Factor Family AT4G12020 28.596 1.85e-56 205