Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3429 ATGGCTATGCAATTACCTTCTTCTTCCTCTAATTCCTCCTCCTCTCATGGTTTCAATTATGATGTGTTCATTAGTTTCAGAGGTTCCGACACTCGATATGGTTTCACCGGTAATCTCTATAAAGCTCTTTCTGACAAAGGAATCCACACCTTCATTGATGACGAGGAGCTTCAGAGAGGTGAAGAAATCACACCTTCGCTCCTCAAGAGCATTGAAGACTCGAGGATTGCCATTGTCGTATTCTCTAAGGACTATGCTTCTTCTTCATTTTGTTTAGACGAACTTGTCCACATCATTCATTGCTCCAATGAAAAGGGTAGCACGGTTATCCCTGTTTTCTATGGTACAGAGCCTTCTCATGTGCGAAAACTGAATGATAGTTATGGTGAAGCACTTGCTAAGCATGAACAGGTGTTTCAAAATGACAAGGAAGACATGGAGCGGTTGAAGAAATGGAAGAAAGCTCTTAATCAAGCTGCTAACTTATCTGGCCACCATTTCAATCTTGGAAATGAATATGAACGTGATTTTATTGAAAAAATAGTTACAGACGTCTCCTACAAGATCAACCATGTTCCTTTACATGTTGCTGATTACCTTGTTGGACTCCAATCTCGAATATCAGCAGTGAATTCGCTTCTAGACTTGGGATCTAATGATGGAGTCTGCATAATAGGAATCCTTGGAACTGGAGGAATGGGAAAAACAACCCTTGCTGAAGCAGTTTATAATTTAATTGCTAATCAATTTGAATGTAACTGTTTCCTTCACAATGTTAGACAAAAATCAGATATACATGGTTTAGTGTATCTCCAAGAGCAGCTCCTCTCCAAATCAATCGGATTCAAAACTCAGTTTGGACATGTTAATGAAGGAATTTCAATCTTAAAACGAAGGCTATGTAAAAAGAAAGTTTTGCTGATTCTTGATGATGTTGACGAGCTGGAACAACTTCGATCTTTGATTGGAGAGCCTAATTGGCTTGGTCCTGGCAGCAAAGTCATCATTACCACTCGAGACAAACATTTGTTATCGTCTCATGGGATTAAAAAAATATATGAAGCAGATGGTTTAAATAAGGAACAAGCTCTTGAGTTGTTAAGAAAGGTGGCTTTTAAAAGTAACAAAAATGATTCAAGCTATGATTATATTTTAAACCGTGCAGCTAAATATGCTTCTGGCCTTCCATTAGCTTTAGAAGTAGTGGGTTCCAACTTGTCTGGAAGGAGTGTAGAAGAATGCGAGTCTTTATTAGATAAGTATGAAAGAATTCCACATAAAAATATCCTAAAGACACTTAAAGTAAGCTTTGTCGCTTTGGAAGATGATCAAAAGAGTGTCTTTTTGGATATTGCTTGTTTCTTTAAAGGGTGTAATCTGGCATATATTGAAGAGGAACTTCAATCTCATTATGATCATGATATAAAAATCGACCTCACAGTGTTGGTTGAAAAATCTCTCATAAATTTTGTGATAATTTAA 1482 0.3718 MAMQLPSSSSNSSSSHGFNYDVFISFRGSDTRYGFTGNLYKALSDKGIHTFIDDEELQRGEEITPSLLKSIEDSRIAIVVFSKDYASSSFCLDELVHIIHCSNEKGSTVIPVFYGTEPSHVRKLNDSYGEALAKHEQVFQNDKEDMERLKKWKKALNQAANLSGHHFNLGNEYERDFIEKIVTDVSYKINHVPLHVADYLVGLQSRISAVNSLLDLGSNDGVCIIGILGTGGMGKTTLAEAVYNLIANQFECNCFLHNVRQKSDIHGLVYLQEQLLSKSIGFKTQFGHVNEGISILKRRLCKKKVLLILDDVDELEQLRSLIGEPNWLGPGSKVIITTRDKHLLSSHGIKKIYEADGLNKEQALELLRKVAFKSNKNDSSYDYILNRAAKYASGLPLALEVVGSNLSGRSVEECESLLDKYERIPHKNILKTLKVSFVALEDDQKSVFLDIACFFKGCNLAYIEEELQSHYDHDIKIDLTVLVEKSLINFVII* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3429 493 Pfam NB-ARC domain 208 422 IPR002182 GO:0043531
Mal6g3429 493 PRINTS Disease resistance protein signature 299 313 - -
Mal6g3429 493 PRINTS Disease resistance protein signature 392 406 - -
Mal6g3429 493 PRINTS Disease resistance protein signature 224 239 - -
Mal6g3429 493 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 490 IPR044974 GO:0006952
Mal6g3429 493 Gene3D - 190 353 IPR027417 -
Mal6g3429 493 CDD AAA 201 315 - -
Mal6g3429 493 ProSiteProfiles TIR domain profile. 18 189 IPR000157 GO:0007165
Mal6g3429 493 Pfam TIR domain 19 191 IPR000157 GO:0007165
Mal6g3429 493 Gene3D - 18 189 IPR035897 -
Mal6g3429 493 Gene3D - 357 441 IPR042197 -
Mal6g3429 493 SMART till_3 19 162 IPR000157 GO:0007165
Mal6g3429 493 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 164 IPR035897 -
Mal6g3429 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 451 IPR027417 -
Mal6g3429 493 PANTHER ARCHAEAL ATPASE 29 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3429 Mal-Chr6 99967483 99969758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3429 201 488 WRKY Transcription Factor Family AT5G45050 33.904 8.77e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3429 - - mtr:MTR_6g072290 715.687