Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3426 ATGGCTATGCACTCACCTTCCTCTTCATTTTCTTATGGATTCACCTACCATGTGTTCCTAAGTTTCAGGGGCCCTGACACTCGGTACAGTTTTACCGGAAATCTCTACAAGGCTCTTATTGACAAGGGAATCCACACCTTCATTGATGACAATGATCTTGAAAGAGGAGATGAAATCACACCATCTCTCATCAAGGCGATTGAAGAATCTAGGATTTTTATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGATGAACTTGTCCACATCATTCACTGCTACACGACAAAGGGTTGCCTTGTTTTGCCTGTTTTCTTTGGTGTGGATCCTTCTGATGTGCGACATCATACAGGTAGTTATGGTGAAGATCTGACTAAGCATCAAGAGAGGTTCCAAAGTAACAAGGATAACATGAAGAGGTTGCAAAAATGGAAGATAGCTATTAATCGAGCAGCTAACTTGTCTGGCTACCATTTCACTCCTGGATATGAATACAACTTTATTGGGGAGATAGTCAAATACATCTCAGACAAGATCAATCGTGTACCTTTACATGTTGCAGAGTACCCTGTTGGATTAGAGTCCCGAGTGCAACACGTGAAAAGGCTTCTTGATCAAGGATCTGATGATGCGGTCCACATGGTAGGACTTTATGGTACTGGAGGCTCGGGTAAATCAACACTTGCAAAAGAAATTTATAATTTTATTGGTGATCAATTTGAAGGTTTATGTTTTCTTCATAATGTGAGAGAGAATTCAGCTAAAAATAACTTGAAACATCTCCAGGAGGAGTTTCTTTTGAAAACAATTGGATTGAACATTAAAATAGGAGATGTTAGTGAGGGAGTTCCAATCATAAAGGAAAGGCTATGTAGAAAGAAGATTCTTTTGATTCTCGATGATGTTGACACTGTGAAACAACTGCAAGTTTTGGCTGGAGGAGTTGATTGGTTCGGTCCTGGAAGCAGAGTCATCATTACTACTCGAGACAAACACTTACTAATTAGTCATGAGATAAAAAGAACATATGCTATACAAGGGTTGCATGAGACAGAAGCTCTTGAATTGTTGAGGTGGACGTCTTTTAAAAATAATGAAGTTCCTTCAAGTTATGAAGACATTTTAAATCGTGTAGTTACATATGCTAATGGCCTACCGTTAGTTATTGAAATAGTGGGTTCCAACTTGTTTGGAAAGAGAATAGAAGAATGGAAGTATACGTTAGACGGGTATGAAAACATTCCCAATAATAAGATCCAAGAGATACTTAAAGTAAGCTATGATGATTTGCAAGAAGAGGAGCAAAGTGTGTTTCTGGATATTGCTTGTTGCTTCAAAGGGTGTAAATGGGTGGAAGTCGGAGATATACTTCATGCTTATTATGGTCATTGCATAAAACATCATGTTAGAGTTTTAGCTGAAAAATCTCTCATATACCATTGGAAATATGATGGTGATGTGACCTTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAACAATCACTTAAAGAGCCTGGAGAACGCAGTAGGTTGTGGTGTCATGATGATATAGTTCACGTTTTACAGGAAAACACGGGAACTAGTAAAATTGAAATGATATATCTGAACTGCCCCACGGAAGCTGTAATAAGCTGGAATGGAAAGGCCTTCAAGAAGATGATAAATCTCAAAACACTAATCATAAAAGGTGGTCATTTTTCCAAAGGCTCCCGACATTTTCCAAGTAGTTTGAGAATATTAGAATGGCAAAGATATCCTTTACAGTGTATATCATTTAGCATTTCGAACAAGACGTTTGAGAAGATGAAAATTTTGAAATTTGACAATTGTGAATACTTAACAAATATATCTGATGTGTCGTGTCTCCCAAATTTAGAAAAGGTTTCATTTAAAAATTGTAAGAAATTAATTAAAATTCATGATTCTATTGGATTCCTGAGTAAACTTCAAACCTTGACTGCTGAGAGTTGTGGCAAATTAGTGAGTTTTCCACCGTTAAAGTTAAACTCTCTTCTAAAGTTAGAACTTTCATATTGTACAAGTCTCAAGAAATTTCCCGAAATATTGGACAAGATGAAAAATATCAGCGAGATTAAAATCTTACGGAACTAA 2136 0.3694 MAMHSPSSSFSYGFTYHVFLSFRGPDTRYSFTGNLYKALIDKGIHTFIDDNDLERGDEITPSLIKAIEESRIFIPVFSINYASSSFCLDELVHIIHCYTTKGCLVLPVFFGVDPSDVRHHTGSYGEDLTKHQERFQSNKDNMKRLQKWKIAINRAANLSGYHFTPGYEYNFIGEIVKYISDKINRVPLHVAEYPVGLESRVQHVKRLLDQGSDDAVHMVGLYGTGGSGKSTLAKEIYNFIGDQFEGLCFLHNVRENSAKNNLKHLQEEFLLKTIGLNIKIGDVSEGVPIIKERLCRKKILLILDDVDTVKQLQVLAGGVDWFGPGSRVIITTRDKHLLISHEIKRTYAIQGLHETEALELLRWTSFKNNEVPSSYEDILNRVVTYANGLPLVIEIVGSNLFGKRIEEWKYTLDGYENIPNNKIQEILKVSYDDLQEEEQSVFLDIACCFKGCKWVEVGDILHAYYGHCIKHHVRVLAEKSLIYHWKYDGDVTLHDLIEDMGKEVVRQQSLKEPGERSRLWCHDDIVHVLQENTGTSKIEMIYLNCPTEAVISWNGKAFKKMINLKTLIIKGGHFSKGSRHFPSSLRILEWQRYPLQCISFSISNKTFEKMKILKFDNCEYLTNISDVSCLPNLEKVSFKNCKKLIKIHDSIGFLSKLQTLTAESCGKLVSFPPLKLNSLLKLELSYCTSLKKFPEILDKMKNISEIKILRN* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3426 711 CDD AAA 195 334 - -
Mal6g3426 711 SMART AAA_5 215 352 IPR003593 -
Mal6g3426 711 Gene3D Ribonuclease Inhibitor 542 708 IPR032675 -
Mal6g3426 711 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Mal6g3426 711 Pfam TIR domain 16 182 IPR000157 GO:0007165
Mal6g3426 711 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 708 IPR044974 GO:0006952
Mal6g3426 711 Gene3D - 351 435 IPR042197 -
Mal6g3426 711 PANTHER ARCHAEAL ATPASE 26 708 - -
Mal6g3426 711 SUPERFAMILY L domain-like 543 711 - -
Mal6g3426 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 445 IPR027417 -
Mal6g3426 711 Pfam NB-ARC domain 198 432 IPR002182 GO:0043531
Mal6g3426 711 Gene3D - 14 182 IPR035897 -
Mal6g3426 711 PRINTS Disease resistance protein signature 293 307 - -
Mal6g3426 711 PRINTS Disease resistance protein signature 674 690 - -
Mal6g3426 711 PRINTS Disease resistance protein signature 386 400 - -
Mal6g3426 711 PRINTS Disease resistance protein signature 218 233 - -
Mal6g3426 711 Gene3D - 183 345 IPR027417 -
Mal6g3426 711 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 161 IPR035897 -
Mal6g3426 711 SUPERFAMILY "Winged helix" DNA-binding domain 421 530 IPR036390 -
Mal6g3426 711 SMART till_3 15 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3426 Mal-Chr6 99895705 99898929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3426 5 703 WRKY Transcription Factor Family AT4G12020 28.533 1.08e-69 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3426 - - mtr:MTR_6g071935 991.49