Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3421 ATGGGTAAAGAAGTCGTCCGACAAGAATCAATTAAAGAGCTTGGAGAACGCAGTAGGTTGTGGTATCACGATGATATAATTGATACTTTAAAGAACAACAAAGGAACTAGGAACATTGAAATGATATATTTGAATTTTCCCTCAATGGAAAACGTAATAAACTGGAATGGAAAGGCCTTTGAGAAGAGGACGAATCTGAAAACACTTATCATTCAAAATGTTCATTTTTCAATTGTGTATATTTATAATTCACTATTATATTATATTTTTAATATCAACTTATTTATTTGTTTTTTTATGCAGGAGTTCAACTATATGAAAGTCTTGACATTGGACGATTGTGATTATTTAACCCATATACCCGATGTCTCAGGTTTTCCAAATTTAGAAGAGTTCTCATTTGAAAATTGTCATAGTTTAATTACAATTGACAGTTCGATTGGGTACCTAAATAAACTTAAAATCTTAAATGCATGGGGTTGCATCAAGCTCGAGACTTTTCCACCCTTACGGGTGCCCTCCCTTAAGAAATTGCAACTCTCTTGCTGTGAGAGTCTCAAGAGTTTTCCAGAATTATTATGCAAGATGACAAATATAAAAGCTATATTGTTATCTGATACTTCCATAGAAGAATTGCCATTTTCGTTTCAAAATCTCAGTGAACTTCGTCGCTTACACATATGTGAACATGGAATGCTCAGGTTCCCAAAACATAATGATAAAATGTATTCTATAGTGTTTCCAAATGTGGAATATCTTGTACTCTCAAACAGAAACCTCCGAGATAGATGTCTCCAAATAGTTCTCAAGTGGTGTGCTAATGTGAAATATCTATTCTTAGAGAATAACAATTTGAAAATTCTTCCTGAGTGCCTTAGTGAATGTCACCTTCTTAAGCATCTTTATTTGGATTATTGCGAGTTTCTTGAGGAAATTAGAGGAATTCCACCGAATCATGAAAAGCTTTATAAACTACATGAGGCTGGATGCACCGATATTCGATTCCCAAACGGAAGAGAGGGGATTCCAGATTGGTTCGAGCACCAAAGCAGGGGACCCATAATATCTTTTTGTGAGGATGAGAAGATTAGAATATTATGCACTGCACAAATGGGAATCCACGTCGTGAAGGATAAAAGCAACACGGAGGATGAGGATGTGATATTCACCAACCCTTATATAAAATATAGATCTTTATATTTTTATTTAGGATATTCCTACTAG 1224 0.3456 MGKEVVRQESIKELGERSRLWYHDDIIDTLKNNKGTRNIEMIYLNFPSMENVINWNGKAFEKRTNLKTLIIQNVHFSIVYIYNSLLYYIFNINLFICFFMQEFNYMKVLTLDDCDYLTHIPDVSGFPNLEEFSFENCHSLITIDSSIGYLNKLKILNAWGCIKLETFPPLRVPSLKKLQLSCCESLKSFPELLCKMTNIKAILLSDTSIEELPFSFQNLSELRRLHICEHGMLRFPKHNDKMYSIVFPNVEYLVLSNRNLRDRCLQIVLKWCANVKYLFLENNNLKILPECLSECHLLKHLYLDYCEFLEEIRGIPPNHEKLYKLHEAGCTDIRFPNGREGIPDWFEHQSRGPIISFCEDEKIRILCTAQMGIHVVKDKSNTEDEDVIFTNPYIKYRSLYFYLGYSY* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3421 407 Pfam Leucine rich repeat 248 307 IPR001611 GO:0005515
Mal6g3421 407 SUPERFAMILY L domain-like 38 330 - -
Mal6g3421 407 Gene3D Ribonuclease Inhibitor 19 354 IPR032675 -
Mal6g3421 407 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 365 IPR044974 GO:0006952
Mal6g3421 407 PANTHER ARCHAEAL ATPASE 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3421 Mal-Chr6 99510659 99516107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3421 2 227 WRKY Transcription Factor Family AT4G12020 32.714 1.40e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3421 - - mtr:MTR_6g471270 441.425