Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3420 ATGGCTGTGCCATCACCTTCCTCTTCCTCTTCATTTTCCTCTGAATTCACTTACCAAGTGTTCCTCAGCTTCAGGGGGAGTGACACTCGTAGCGGTTTTACTGGTCATCTCTACAAGGCTCTTACTGAAAAGGGAATCCACACCTTCATTGATGACAATGATCTTCAAAGAGGAGATGAAATCACACCATCACTCGTCAAGGCCATTGAAGAATCTAGGATTTTTATTCCTATATTTTCTGCCAACTATGCCTCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCTATGCTACAAGACAAAGGGTCGTCTCGTTTTGCCTGTTTTCTATGGTGTGGATCCTACTCACATACGACATCAGAATGGGAGCTATGGTGAACATCTCCTTGAGCACGAGCAGAGGTTCCAAAATAACAAGAAAAACATGGAGCGATTGCATCAATGGAAGATGGCTCTGACCCAAGCGGCTAACTTGTCTGGCTACGCTTTTACTAATGGATATGAATACAAGTTTATTGGAGAGATAGTTAAATCCATCTCCAACAAGATCAGTCGTGAGCCCTTACAAGTTGCCACTAACCCTGTTGGATTACAGTCTCAAGTACAACAAGTGAAATCACTTCTTGATAATGGATCTGATGATGGGGTCCATATGGTTGGAATTTATGGGATTGGAGGAATGGGCAAATCAACACTTGCAAGAGCAGTCTATAATTTTGTTGCTGATCAATTTGAAGGTTTATGTTTTCTTCATGATGTGAGAGAGAATTCAGCCAAAAGAAACTTGGAACATCTCCAAGAGAAGCTCCTTCTAAAAACAACTGGATCGAAAATTGAGTTAGATCATGTTAGTGAGGGTATTCCAATCATAAAGGAAAGACTATGTAGGAAGAAGATTCCTTTGATTCTCGATGATGTTGACAATATTCAGCAACTCCATGCTTTGGCTGGAGGACATGATTGGTTTGGCGGTGGAAGCAGAGTCATTATTACCACTCGAACCAAACACTTAGTAAGAAGTCATGGGATAGAAAGTACACATGCAGTAGAAGGGTTAAACGGGACTGAAGCTCTTGAATTGTTGAAGTGGATGGCTTTTAAAAGTGACATGGTTCCTTCTGGTTATGAAGAGATTTTAAATCGTACAGTTGCGTATGCTTCTGGCCTTCCGTTAGTTTTAGAAATAACGGGTTCTAACTTGTTTGGAAAGAGCATAGAAGAATGGAAGGGTACATTAGATGGATATGAAAAGATTCCCAATAGAAAGATCCAAGAGATACTTAGAGTAAGCTATGATGCTTTGGAGGAAGAGGAGCAAAGTGTCTTTCTGGATATAGCTTGTTGCTTCAAAGGGTATAGAGTGATAGATGTCCAAGATATACTTCATGCTCATTATGGCCATTGCATAAAACATCATGTTACAGCGTTGGCCGAAAAATCTCTCGTACATCATCAGAGATCTTTCAGTTATGTGACATTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCACCCAAGCTTGGAGAACGCAGTAGTTTGTGGTTTCACGATGATATAGTTCAAGTTTTAAAAAAAAATATCGGAACTGAGAACATTGAAATGATACATTTGAATTGTCCATCAAAGGAACACATAATAGACTGGAATGGAAAGGCCTTCAAGAAAATGACAAATCTCAAAACACTTATCATTGAAAATGGCCAGTTTTCTGAAGGTCCCAAATATCTTCCAAGTAGTTTGAGACTTTTGAAATGGGAAGGATGTCCTTTGAAGTCTCTATCATCTAGTGTTTTGAACAAGACGTTCGAGAAGATGAAAATTTTGAAAATTGATAATTGTGAATACTTAACATATATATCCGACGTCTCGTGTCTCCCAAATTTAGAAATTTTTTCATTCGAAAATTGTAAGAGTTTAATTACAATTCATGATTCTGTTGGGTTCTTGAGTCAGCTTCAAATTTTGAATGCTAAGGGTTGTGAAAAGCTATTGAGTTTTCCACCCTTAAAGTTGAACTCTCTTCATGAGTTGAAACTTTCATCTTGTAAAAGTCTCAAGAAATTTCAAGAAATATTGGGCAAGATGAAAAATATCAAGAAGATTATTTTGAGAGAAACTGGCATTGAAGAATTTCCCTTTTCATTTCATAATCTTACCGGACTCACGGATTTAACTATAGAGGGATGTGGAATACTTAGGTTGCCAAGTAGCATTCTCATGATGTCAAATTTGTTGGAAGTTACAATTTTGGGTTATAGTCAATTATCACCAAAACCGAATGATAAATTGACCAGTTCCTCGTTGTCTTCAAATGTGAATGTTCTTCGCCTTAAAGCAAGCAATCATGAATTTCTAACAATAGTTCTGATGTGGTTTTCTAATGTGGAAATCTTAAACCTGTCTGGTAGCAATATCAAAATTCTTCCTGAATGCCTAAAAGAATGCTTCTCAATAAAGTGCATTGATTTAGATGGTTGCAGTTCTCTTGAGGAAATTAGAGGGATTCCGCCAAATCTAAAGGCATTGTCTGCATTGCGGTGCAAATCATTGACTTCATCAAGTAAAAGCATGTTATTGAGTCAGGAACTGCATGAGGTTGGAGGCACCGAGTTTTGTTTTCCTTCATCACCAAGTGAGAGAATTCCGGAGTGGTTTGAGCACCAAACAAGAGAATCAATTTCTTTTTCGTTCCGTAACAACCTCCCTTCCTTAGTTCTCTTATTTTCTTCAAAACGAATGCCTAAATTGGGCAACCACCCTCTCAACCAAGATAATTTGATCGTCAACCCTTTCTACCGAGATTTTGTATATAACTCTGGTATAAGATTGGAACCGGATCATACATATCTATTTCATTTTAATGTAAATTTTAAATCTATGATGGACGAAGCACTTTTGAAAAATGAATGGATTCATGCTGAAGTTAGGTTTGGGGGTTGGGATGACGGGTGTGTTGTAGAAAGTGGAATCCATGTAATCAAACATTTGAATAGCATGGATGATTTTCAATTCAACGATTCTTCCTTACGCAAAAATAGAAAATCAGATGAATATCTCAAGAGCTCACAATCATTTATAAAATCACCGAATGATGAGGACATATCAGCAACACCACCACCTCCCAGTCCCAGATACCGAGTGTTGAGGACATCAAGAGTCTTATATTATAAAGTAAAAACAATAGAAGAAAATCCTAACAGCTGTGCAATAATGTGA 3237 0.3784 MAVPSPSSSSSFSSEFTYQVFLSFRGSDTRSGFTGHLYKALTEKGIHTFIDDNDLQRGDEITPSLVKAIEESRIFIPIFSANYASSSFCLDELVHIILCYKTKGRLVLPVFYGVDPTHIRHQNGSYGEHLLEHEQRFQNNKKNMERLHQWKMALTQAANLSGYAFTNGYEYKFIGEIVKSISNKISREPLQVATNPVGLQSQVQQVKSLLDNGSDDGVHMVGIYGIGGMGKSTLARAVYNFVADQFEGLCFLHDVRENSAKRNLEHLQEKLLLKTTGSKIELDHVSEGIPIIKERLCRKKIPLILDDVDNIQQLHALAGGHDWFGGGSRVIITTRTKHLVRSHGIESTHAVEGLNGTEALELLKWMAFKSDMVPSGYEEILNRTVAYASGLPLVLEITGSNLFGKSIEEWKGTLDGYEKIPNRKIQEILRVSYDALEEEEQSVFLDIACCFKGYRVIDVQDILHAHYGHCIKHHVTALAEKSLVHHQRSFSYVTLHDLIEDMGKEVVRQESPKLGERSSLWFHDDIVQVLKKNIGTENIEMIHLNCPSKEHIIDWNGKAFKKMTNLKTLIIENGQFSEGPKYLPSSLRLLKWEGCPLKSLSSSVLNKTFEKMKILKIDNCEYLTYISDVSCLPNLEIFSFENCKSLITIHDSVGFLSQLQILNAKGCEKLLSFPPLKLNSLHELKLSSCKSLKKFQEILGKMKNIKKIILRETGIEEFPFSFHNLTGLTDLTIEGCGILRLPSSILMMSNLLEVTILGYSQLSPKPNDKLTSSSLSSNVNVLRLKASNHEFLTIVLMWFSNVEILNLSGSNIKILPECLKECFSIKCIDLDGCSSLEEIRGIPPNLKALSALRCKSLTSSSKSMLLSQELHEVGGTEFCFPSSPSERIPEWFEHQTRESISFSFRNNLPSLVLLFSSKRMPKLGNHPLNQDNLIVNPFYRDFVYNSGIRLEPDHTYLFHFNVNFKSMMDEALLKNEWIHAEVRFGGWDDGCVVESGIHVIKHLNSMDDFQFNDSSLRKNRKSDEYLKSSQSFIKSPNDEDISATPPPPSPRYRVLRTSRVLYYKVKTIEENPNSCAIM* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3420 1078 Gene3D - 183 347 IPR027417 -
Mal6g3420 1078 Gene3D - 15 182 IPR035897 -
Mal6g3420 1078 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mal6g3420 1078 PANTHER ARCHAEAL ATPASE 28 985 - -
Mal6g3420 1078 Gene3D - 353 437 IPR042197 -
Mal6g3420 1078 Gene3D Ribonuclease Inhibitor 482 691 IPR032675 -
Mal6g3420 1078 SMART till_3 17 160 IPR000157 GO:0007165
Mal6g3420 1078 Pfam TIR domain 18 189 IPR000157 GO:0007165
Mal6g3420 1078 ProSitePatterns Alpha-L-fucosidase putative active site. 584 595 IPR018526 GO:0004560|GO:0005975
Mal6g3420 1078 Gene3D Ribonuclease Inhibitor 692 874 IPR032675 -
Mal6g3420 1078 PRINTS Disease resistance protein signature 295 309 - -
Mal6g3420 1078 PRINTS Disease resistance protein signature 220 235 - -
Mal6g3420 1078 PRINTS Disease resistance protein signature 676 692 - -
Mal6g3420 1078 PRINTS Disease resistance protein signature 388 402 - -
Mal6g3420 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 447 IPR027417 -
Mal6g3420 1078 CDD AAA 197 334 - -
Mal6g3420 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 985 IPR044974 GO:0006952
Mal6g3420 1078 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Mal6g3420 1078 Pfam NB-ARC domain 201 433 IPR002182 GO:0043531
Mal6g3420 1078 SUPERFAMILY "Winged helix" DNA-binding domain 424 531 IPR036390 -
Mal6g3420 1078 SUPERFAMILY L domain-like 548 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3420 Mal-Chr6 99503211 99507771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3420 12 767 WRKY Transcription Factor Family AT4G12020 29.223 7.48e-70 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3420 - - mtr:MTR_6g072460 1357.43