Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3419 ATGGCTATACAATTACCTTCTTCTTCCTCTGATGGTTTCAATTATGATGTGTTCATTAGTTTCAGAGGTACTGACACTCGATTCGGTTTCACCGGTTATCTCTATAAAGCTCTTTCTGACAAAGGAATCCAGACCTTCATGGATGACAAGGAGCTTCAGAAAGGTGACGAAATCACACTTTCGCTCCTCAAGAGCATTGAAGACTCAAGGATTGCCATTATCGTCTTCTCTAAGGACTATGCTTCTTCTTCATTTTGTTTAGACGAACTTGTCCACATCATTCATTGCTGGAATGAAAAAGGTAGCACGGTTATTCCTGTTTTCTATGATGTGGAACCTACTGATGTGCGATATCAGAGTGGGAGTTATCGTGAAGCACTAGCTAAGCATAATAAGAAAAGCATGGATCGGTTGCTGAAATGGAAGAAAGCTCTAAGTCAAGCTTCTAACTTATCTGGCTACCATATCAAACCTAGGACGGAATATGAATACAAGTCTATTGAAAAAATAGTTAAAGACGTTTTCAACAAGATCAATCCTATTCCTTTACATGTTCCTGATTACCTTGTTGGACTTGAACCTAGAATTTTAGAAGTGAATTCACTTCTAGAATTGGGATCTAATGATGGAGTCTGCATAATAGGAATCCTTGGAACTGGAGGAATGGGAAAAACAACACTTGCTGAAGCAGTTTATAATTCAATTGCTAGTCAATTTGAATTTAAGTGTTTCCTTTACAATGTGAGAGAAAATTCAGTTAAGCATGGCTTAATGAATCTCCAAGAGCAGATCCTCTCCAAATCAATCAGATTTGAAGAAAAGTTTGAACATGTTCATCAAGGAATTCCAATCATAAAGCAAAGGTTATGTAAGAAGAAAGTTTTGTTGATTCTTGATGACGTTGACGAGCTGGATCAACTTCGATCTTTGATTGGAGAACCTGATTGGCTTGGTCCTGGCAGCAAAGTTATCATTACCACTCGAGACAAACATTTGTTATCGTCTCATGGGATTAAAAAAATATACGAAGCAGATGGTTTAAATAAGGAACAAGCTCTTGAATTGTTAAGAATGGTGGCATTTAAAAGTAACAAAAATGATTCAAGTTATGATTATATTTTAAATCGTGCAGTTAAATATGCTTCTGGCCTTCCATTAGCTTTAGAAGTAGTGGGTTCCTACTTGTCTGGAAGGAGTGTAGAAGAATGTAAGTCTTTATTAGATAAGTATGAAAGAATTCCACATAAAGAAATCCTAGAGGTACTTAAAGTAAGCTTTGACTCTTTGGACGAAGAACAACAGAGTGTCTTTTTGGATATTGCTTGTTTCTTTAACGGGAAAGGACTTGGAAATGTCGAAAAGATGCTTCATGTTCGTTATGGTCATTGCAAAAAAATCCACCTCAAAGTGTTGGTTGATAAATCTCTCATAAAGATTAAAACTTATAGGGGACTTGATAATGTGACATTACATGATTTGATAGAGGACATGGGTAAAGAAGTCGTCCGAAAAGAATCACCCAACAAGCCTGGAGAACGCAGTAGGTTGTGGTTTCACGATGATATAGTTAAAGTTTTAGAAGAAGATATGGGAACGGCGAACATTGAAATGATATATTTGAATTGTCCCTCAATGGAAAAAGTAAAATACTTGAATGGAAAGGCCTTTGAGAAGATGACAAATCTCAAAACACTTATCATTGAAAATGGTTATTTTTCTAAAGGTCTTGAGTATCTTCCAAGTAGTTTGATAGTATTGAGGTGGAAAGGATGTCCTTCGAGGTCTCTATCATCTTGTATTTCGAACAAGAAGTTCAATTATATGAAAGACTTGACGTTGGACGATTGTAAATATTTAACCCATATACCCGATGTCTCAGGTCTTCCAAATTTAGAAAAGTTCTCATTTCAAAATTGTCATAATTTAATTACAATTCACAATTCAATTGGGTATCTAGATAAACTTGAAATCTTAAATGGTAAGGAATGCATCAAGCTGGAGAGTTTTCCACCCTTATGGTTGCCCTCTCTTAAGGAATTGAAACTCAACTGGTGTACGAGTCTCAAGCGTTTTCCGGAAATATTATGCAAGATAACAAATATAAAAGAGATTGTGTTAGGTAACACTCCCATAGAAGAATTTCCAAATTCGTTTCAAAATCTTAGTGAAATTCGTTGGTTAGATATGTGTTCTAAGTGTAACGAGTGGTACCCAGAAGACCTAGAAGATAATGATAAAATGAATTCTTCCCAAAACGTAGTGCTTTCGAAGGTGGAGTATCTTGATCTTGCATGTGAAAGTATCTCAGATGAATGTCTCCAAATGCTTCTCAACTGGTGTCTTAATGTGACACATGTAGACTTATCAACGAGCAATTTAAAAATTATTCCCGAATGCCTTAGTGAATGTCACCATCTTAGGAAGCTTGATTTGGATGATTGCAAATTTCTTGAGGAAATTAGAGGGTTTCCACGAAATCTTGAAGAGTTTTCTGCAATAGGATGTGAATCATTAAATTCCTCAAGTATAAGAATGCTATTGAGTCAGAATACACATGAGAAACTACATGAGGCTGGATACAAAAAGTTCCGTTTGCTAATCGGAACAAAGGGGATTCCACATTGGTTCGAGCACCAAAGCAGGGGACACAAAACAATTTCTTTTCGGTTTCGTAAAAAGATCCCTTCTATTAATGTTATTATTCTGTTGGAAAGTGAGTATCCAACTCATGAAGTCAAATTTTATGTCAATGACTGTCTACGGGATCTCCCAGAAGGCCAGCTCTACGGAAATTTAGACTTTGAAAACCATGCAGTTTTGTTTGATCTGAAATTGGAAGAAGTACTTTTAGAAAATGAATGGATCACTGTGATGCTTAAGTTGGAAAATGATTATTTTTATACGAAAGATAGGAATGTACAAATGGGAATCCACATGTGGAAGGAGAAAAACAACACGGAGGAGAATGTCATATTCACCAATCCTTATAGTAGTGACACAGAGGAGGATGATTATTATAGTGAATTTATACAGAGGCAGAGCTTGGAAGTTTCTGAGACAGAAACTGTGGATTTTGTACAAATGGGAATCCACGAGGAGAGCAACACGGAGGAGGAGGATGTGATTTTCACCAGTCCTTATAGTGACACAAAATCAGATCAAGATAAGAACTTAGAAGTTTCTGAAACAAAAACTATGGAGAGGCAGAACTTGGAACAAACTATTTCTGAAACAGAAACTGTGCAGAGACAGAGCTTGGAAGAAACTTTTTCTGAGGCAGAACTTGGAAGATGTAATATTTACTGTATGACTCTATTGTTCGAGCGAATAGCTTGTTTATTTGCTCGCAGAGAGACTGCAGAAAAGTGTGCAAGGAGAAAAGAGGAAGAAAAAAAGACGGATTAA 3405 0.3645 MAIQLPSSSSDGFNYDVFISFRGTDTRFGFTGYLYKALSDKGIQTFMDDKELQKGDEITLSLLKSIEDSRIAIIVFSKDYASSSFCLDELVHIIHCWNEKGSTVIPVFYDVEPTDVRYQSGSYREALAKHNKKSMDRLLKWKKALSQASNLSGYHIKPRTEYEYKSIEKIVKDVFNKINPIPLHVPDYLVGLEPRILEVNSLLELGSNDGVCIIGILGTGGMGKTTLAEAVYNSIASQFEFKCFLYNVRENSVKHGLMNLQEQILSKSIRFEEKFEHVHQGIPIIKQRLCKKKVLLILDDVDELDQLRSLIGEPDWLGPGSKVIITTRDKHLLSSHGIKKIYEADGLNKEQALELLRMVAFKSNKNDSSYDYILNRAVKYASGLPLALEVVGSYLSGRSVEECKSLLDKYERIPHKEILEVLKVSFDSLDEEQQSVFLDIACFFNGKGLGNVEKMLHVRYGHCKKIHLKVLVDKSLIKIKTYRGLDNVTLHDLIEDMGKEVVRKESPNKPGERSRLWFHDDIVKVLEEDMGTANIEMIYLNCPSMEKVKYLNGKAFEKMTNLKTLIIENGYFSKGLEYLPSSLIVLRWKGCPSRSLSSCISNKKFNYMKDLTLDDCKYLTHIPDVSGLPNLEKFSFQNCHNLITIHNSIGYLDKLEILNGKECIKLESFPPLWLPSLKELKLNWCTSLKRFPEILCKITNIKEIVLGNTPIEEFPNSFQNLSEIRWLDMCSKCNEWYPEDLEDNDKMNSSQNVVLSKVEYLDLACESISDECLQMLLNWCLNVTHVDLSTSNLKIIPECLSECHHLRKLDLDDCKFLEEIRGFPRNLEEFSAIGCESLNSSSIRMLLSQNTHEKLHEAGYKKFRLLIGTKGIPHWFEHQSRGHKTISFRFRKKIPSINVIILLESEYPTHEVKFYVNDCLRDLPEGQLYGNLDFENHAVLFDLKLEEVLLENEWITVMLKLENDYFYTKDRNVQMGIHMWKEKNNTEENVIFTNPYSSDTEEDDYYSEFIQRQSLEVSETETVDFVQMGIHEESNTEEEDVIFTSPYSDTKSDQDKNLEVSETKTMERQNLEQTISETETVQRQSLEETFSEAELGRCNIYCMTLLFERIACLFARRETAEKCARRKEEEKKTD* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3419 1134 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 961 IPR044974 GO:0006952
Mal6g3419 1134 Gene3D Ribonuclease Inhibitor 735 855 IPR032675 -
Mal6g3419 1134 Gene3D Ribonuclease Inhibitor 518 734 IPR032675 -
Mal6g3419 1134 Gene3D - 176 340 IPR027417 -
Mal6g3419 1134 SUPERFAMILY "Winged helix" DNA-binding domain 416 527 IPR036390 -
Mal6g3419 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 440 IPR027417 -
Mal6g3419 1134 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Mal6g3419 1134 PANTHER ARCHAEAL ATPASE 25 961 - -
Mal6g3419 1134 SMART till_3 14 151 IPR000157 GO:0007165
Mal6g3419 1134 Pfam TIR domain 14 182 IPR000157 GO:0007165
Mal6g3419 1134 Pfam NB-ARC domain 202 412 IPR002182 GO:0043531
Mal6g3419 1134 Gene3D - 346 430 IPR042197 -
Mal6g3419 1134 ProSiteProfiles TIR domain profile. 13 178 IPR000157 GO:0007165
Mal6g3419 1134 CDD AAA 190 308 - -
Mal6g3419 1134 Gene3D - 12 175 IPR035897 -
Mal6g3419 1134 PRINTS Disease resistance protein signature 213 228 - -
Mal6g3419 1134 PRINTS Disease resistance protein signature 288 302 - -
Mal6g3419 1134 PRINTS Disease resistance protein signature 381 395 - -
Mal6g3419 1134 PRINTS Disease resistance protein signature 801 817 - -
Mal6g3419 1134 SUPERFAMILY L domain-like 544 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3419 Mal-Chr6 99474782 99479230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3419 7 729 WRKY Transcription Factor Family AT4G12020 30.689 8.17e-76 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3419 - - mtr:MTR_6g072590 1061.6