Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3408 ATGCAATTACCTTCTTCTTCCTCTTTCTCCTCCGTCTCTAATGATTTCACCTACGATGTGTTCATTAGTTTTAGAGGTTCCGACACTCGATACGGTTTCACCGGTAATCTCTATAAAGCTCTTTCTGACAAAGGAATTCACACCTTCATTGATGACGAGGAGCTTCAGAGAGGTGACGAAATCACACCTTCTCTCCTCAAGAGCATTGAAGACTCGAGGATTGCCATTATCGTATTCTCTAAGGACTATGCTTCTTCTTCATTTTGTTTAGACGAACTTTCCCACATCATTCACTACTTCAAGGAAAAAGGTCGCCTTGTTCTTCCAGTTTTCTATGATGTGGAACCTACTCACGTGCGATATCAAAATGATTGTTTTGGTGAAGCACTTGCTAAGCATAATAAGAAAAGCATGGATCGGTTGCTGAAATGGAAGAAAGCTCTTAGCCAAGCTGCTAACTTATCTGGCTACCATTTCAAACCTGGGACGGAATATGAACACAAATTTATTGAACAAATAGTTAAAGACGTCTCCAACAAGATCAACCGTGTTCCTTTACATGTTGCTGATTACCTTGTTGGACTCGAATCTAGAATTTCAGAAGTGAATTCACTTCTAGAATTGGGATCTAATGATGGAGTCTGCATAATAGGAATCCTTGGAACTGGAGGAATGGGCAAGACAACACTTGCTCAAGCAGTTTATAATTTAATTTTTAATCAATTTGAATGTAAGTGTTTCCTTCACAATGTGAGAGAAAATTCAGTTAAACATGGCTTAGAGTATCTCCAAGAGCAGCTCCTATCCGAATCAATCAGATTTGAAGGAAAGGTTGGACATTTTAATCAAGGAATTACAATCATAAAGGAAAGGCTAGGTAAGAAGAAAGTTTTGTTGATTCTCGACGACGTTGACAAACTAAAGCAATTGCAGGTTTTGGTCGGAGAGCCTGGTTGGCTCGGTCATGGCAGCAGAGTCATCATTACCACTCGAGACAAACATTTGTTATCATCTAATGGGGTTAAAAAAATATACGAAGCAGACGGTTTAAATAAGGAACAAGCTCTTGAATTGTTAAGAAAGGTGGCTTTTAAAAGTAACAAAAAGGATTCAAGCTATGATTCTATTTTAAACCGTGCAGCTGAATATGCTTCTGGCCTTCCATTAGCTTTAGAAGTAGTGGGTTCCAACTTGTCTGGAAGGAGTGTAGAAGAATGTAAGTCTTTATTAGATAAGTATGAAAGAATTCCACATGAAGATATCCTAAAGATACTTAAAGTAAGCTTTGACGCTTTGGAAGATGATCAAAAGAGTGTCTTTTTGGATATTGCTTGTTTCTTCCAAGGGTATAACCTGGCACGTATTAAAGAGGAACTTCAATCTCGTTATGATCATGATATAAAAATCGACCTCACGGTGTTGGTTGAAAAATCTCTCATAAAGATTGACCGTGAATACAGGGACAAACGTAATGTGAGATTACATGACTTGATAGAGGACATGGGTAAAGAAATCGTCCGACAAGAATCACCCAACAATCCTGGAGAGCGTAGTAGGTTGTGGTTTCACGATGATATAGTTAAAGTTTTAGAAGAAGATATGGGAACTGCGCACATTAAAATGATATATTTGGAGTCTCCCATATACCGGATGTCTAAAAATGTAATAGAGTGGAATGGAAATGCCTTCAAGAAGATGACAAATCTCAAATCACTTGTCATTAAAAATGTTGATTTTTCTAAAGATCCTAAATATCTTCCAAATGGTTTGATAGTATTGAGGTGGGAAGGATGTCCTTTGATGTCTCCATCATCTTTAATTTGGAACAAGAAGTTCAACTATATGAAATTCTTGAAATTGGACGAATGTGAATATTTAACCCATATACCCAATGTCTCAGGTCTTCGAAATTTAAAAAAGTTATCCTTTCGAAAGTGTGAGAGTTTAATTACAATTGACTATTCAGTTGGGCACCTAGATAAACTTGAAATCTTAAATGTAACCGATTGCAACAAGCTTGTGAGTTTTCCACCCTTACGGTTGCCCTCTCTTAAGGAATTGACACTCGACAGGTGTACTAGTCTCAAGCGTTTTCCGGAAATATTATGCAAGATGACAAATATAAAAGAGATTGTGTTATATAACACTCCCATAGAAGAATTTCCAAATTCGTTTCAAAATCTTAGTGAAATTCGTTGCTTATATATGCTTCCTGATGAGTTTGATAGGAAGTGTTTCCTAGAAGACCTAGAAGATAATGATAAAATGAATTCTGCCGAAAACGTAGTGCTTTCGAAGGTGGGATATCTTGATTTTGAATGTTGTAGCAGTCTCTCAGATGAATATCTCCAAATGCTACTAAACTGGTGTCTTAATGTGACACATGTAGACTTATCACAGAGCAATTTAAAAATTCTTCCTGAATGCTTTCGTGAATGTCACCTTATGAGGATTCTCAAATTGGAATGTTGCGAGTTTCTTGAAGAAATTAGGGGGTTTCCACCAAATCTTGAAGAGTTTTCTGCAGAGGGATGCAAATCATTGAGTTCCTCAAGTAGAAGAATGCTATTGAGTCAGGAACTACATGAGAAACTACATGAGGCTGGATACAAAAAGTTTTGTTTGCTAACCGGAACAGAGGGGATTCCAGATTGGTTCGAGCACCAAAGCAGGGGACACAAAACAATTTCTTTCCGGTTTCGTAAAAAGATCCCTTCTATTAATGTTATTATTCTGTTGGAAAGTGAGTATCCAACTCACGAAGTCGTATTTTATGTCAATGACTGTCCACGGCATCTCCCAGAAGGCGACCTCTACGACGAGTATGGATCAGTGATGCCACCAGAACATGCAGTTTTGTTTGATCTGAAATTGGAAGAAGTACTTTTAGAAAATGAATGGATCACTGTGATGCTTAAGTTGGAAAAATTTGGGTATATTGATTATGATTCTACAAAAGATGCGAATATACAAATGGGAATCCACGTGTGGAAGAAGAAAAACAACATGGAGGAGGATGTGATTTTCACCAATACTTGGTGA 3042 0.3751 MQLPSSSSFSSVSNDFTYDVFISFRGSDTRYGFTGNLYKALSDKGIHTFIDDEELQRGDEITPSLLKSIEDSRIAIIVFSKDYASSSFCLDELSHIIHYFKEKGRLVLPVFYDVEPTHVRYQNDCFGEALAKHNKKSMDRLLKWKKALSQAANLSGYHFKPGTEYEHKFIEQIVKDVSNKINRVPLHVADYLVGLESRISEVNSLLELGSNDGVCIIGILGTGGMGKTTLAQAVYNLIFNQFECKCFLHNVRENSVKHGLEYLQEQLLSESIRFEGKVGHFNQGITIIKERLGKKKVLLILDDVDKLKQLQVLVGEPGWLGHGSRVIITTRDKHLLSSNGVKKIYEADGLNKEQALELLRKVAFKSNKKDSSYDSILNRAAEYASGLPLALEVVGSNLSGRSVEECKSLLDKYERIPHEDILKILKVSFDALEDDQKSVFLDIACFFQGYNLARIKEELQSRYDHDIKIDLTVLVEKSLIKIDREYRDKRNVRLHDLIEDMGKEIVRQESPNNPGERSRLWFHDDIVKVLEEDMGTAHIKMIYLESPIYRMSKNVIEWNGNAFKKMTNLKSLVIKNVDFSKDPKYLPNGLIVLRWEGCPLMSPSSLIWNKKFNYMKFLKLDECEYLTHIPNVSGLRNLKKLSFRKCESLITIDYSVGHLDKLEILNVTDCNKLVSFPPLRLPSLKELTLDRCTSLKRFPEILCKMTNIKEIVLYNTPIEEFPNSFQNLSEIRCLYMLPDEFDRKCFLEDLEDNDKMNSAENVVLSKVGYLDFECCSSLSDEYLQMLLNWCLNVTHVDLSQSNLKILPECFRECHLMRILKLECCEFLEEIRGFPPNLEEFSAEGCKSLSSSSRRMLLSQELHEKLHEAGYKKFCLLTGTEGIPDWFEHQSRGHKTISFRFRKKIPSINVIILLESEYPTHEVVFYVNDCPRHLPEGDLYDEYGSVMPPEHAVLFDLKLEEVLLENEWITVMLKLEKFGYIDYDSTKDANIQMGIHVWKKKNNMEEDVIFTNTW* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3408 1013 Gene3D Ribonuclease Inhibitor 718 859 IPR032675 -
Mal6g3408 1013 Gene3D - 349 428 IPR042197 -
Mal6g3408 1013 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 157 IPR035897 -
Mal6g3408 1013 SUPERFAMILY L domain-like 507 854 - -
Mal6g3408 1013 Gene3D - 429 504 IPR036388 -
Mal6g3408 1013 SMART till_3 17 154 IPR000157 GO:0007165
Mal6g3408 1013 Pfam NB-ARC domain 203 418 IPR002182 GO:0043531
Mal6g3408 1013 PANTHER ARCHAEAL ATPASE 28 974 - -
Mal6g3408 1013 CDD AAA 193 330 - -
Mal6g3408 1013 Gene3D - 182 344 IPR027417 -
Mal6g3408 1013 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Mal6g3408 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 974 IPR044974 GO:0006952
Mal6g3408 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 443 IPR027417 -
Mal6g3408 1013 Pfam TIR domain 18 183 IPR000157 GO:0007165
Mal6g3408 1013 PRINTS Disease resistance protein signature 216 231 - -
Mal6g3408 1013 PRINTS Disease resistance protein signature 291 305 - -
Mal6g3408 1013 PRINTS Disease resistance protein signature 679 695 - -
Mal6g3408 1013 PRINTS Disease resistance protein signature 384 398 - -
Mal6g3408 1013 Gene3D Ribonuclease Inhibitor 543 705 IPR032675 -
Mal6g3408 1013 Gene3D - 16 181 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3408 Mal-Chr6 99374887 99378534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3408 9 728 WRKY Transcription Factor Family AT4G12020 28.590 3.64e-66 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3408 - - mtr:MTR_6g072460 973.77