Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3386 ATGCCACAGAATCAGATTCCTGATCTTTCACTTCAAATTAGTCTACCAAATAGTTCTCCTTCATCAATTTGCACAACAAATGAAATTGATGATTTAGATTCATCTTTTGATATATGGAAAAATATTAATGATGCTACTTCTACTCAAGAAGGTTTCAAATCTCATAGTGATTGTTTTTCATCTTCACTAAAAAATACAGAACTTTCATTATCAAATTCCAAAACAAAAACTACTACTTTTTCAGAAGCTGAGAGTCCTTGGAAGAGAAAAGAATTTGTTAGATTAAAACCCTTTAATGGAATTCCTCTCTATAGTGATAATAATCCTTCAATAATTGAGAAAGATTCATATTTTTCTCTATATCCTTCATGTGCTACTAGTTCTTCAACTTTTTGTGGTAACAATGGTTTTGAGGGTGTTAAGGGAACTTCAAGGTTTAATGGTATAACTATGGAGAGTTTAAGACCTCAAAAGTTTCAATACATGAATCATGAGCATCATCTTCAACAGCAGAAGCAGAATCAATTTGGAAATAGTGATTTTGGAAATGGATTTGTGAGGTCAAGAATGATGATTCCAAGGCAACAACAAAGTAATAAGAGGAACATGAGGGCTCCGAGAATGCGGTGGACTAGTTCGCTTCATAATCGATTTGTTCACGCCGTTGATCTTCTCGGCGGCCATGAAAGAGCTACTCCTAAATCAGTTTTGGAGCTAATGGATGTGAAAGATCTAACACTAGCTCATGTGAAGAGCCATTTACAGATGTACAGAACTGTTAAAAACACTGACAAGCCAGCAACAGCTTCTTCAGATGGAGATGAGAATTTCATGTCCCAAACACCACCACATAATCAAAATAAGAACTATGCATCTCTAGATAATGATATGAACTACACTTCCAACAATTTATGGGCTAATTCTTCTTCAAGTAAAGGAACATGGACACAAGGATATTCCAGAGATCAATTTGATGAGCTTAGTACACAAGAAATCATATCATCTCACCACATTGGAAAGCTTCCTCAGGGTAGCAACTGCATACAATCAAGAAGCTCCAACGATCAAAACATAGACTGTCCAAATCCAAACTTGGAGTTCACCTTAGGGAGATCAAATTAA 1122 0.3547 MPQNQIPDLSLQISLPNSSPSSICTTNEIDDLDSSFDIWKNINDATSTQEGFKSHSDCFSSSLKNTELSLSNSKTKTTTFSEAESPWKRKEFVRLKPFNGIPLYSDNNPSIIEKDSYFSLYPSCATSSSTFCGNNGFEGVKGTSRFNGITMESLRPQKFQYMNHEHHLQQQKQNQFGNSDFGNGFVRSRMMIPRQQQSNKRNMRAPRMRWTSSLHNRFVHAVDLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPATASSDGDENFMSQTPPHNQNKNYASLDNDMNYTSNNLWANSSSSKGTWTQGYSRDQFDELSTQEIISSHHIGKLPQGSNCIQSRSSNDQNIDCPNPNLEFTLGRSN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3386 373 Gene3D - 205 262 - -
Mal6g3386 373 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 373 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mal6g3386 373 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677
Mal6g3386 373 MobiDBLite consensus disorder prediction 261 295 - -
Mal6g3386 373 MobiDBLite consensus disorder prediction 339 373 - -
Mal6g3386 373 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 373 - -
Mal6g3386 373 SUPERFAMILY Homeodomain-like 203 260 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3386 Mal-Chr6 98835230 98845355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3386 96 371 G2-like Transcription Factor Family AT5G16560 39.871 2.56e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal6g3386 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3386 - - cam:101493712 464.922