Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3346 ATGGCACTAGTCCACCGTCGCAACAGCCCCAAACTCCGGCTACCAGAAATCTCCGACCACCGTCCTCGTTTCCCTGTCCCCCTTCCAGCCAACATCTACAAACAATCTTCTTCCTCCTCATCCGCCGCCGTCTCCGGCGGCGGTGGTGACAATGTTTCTGCCGGTGACTTCGAAAAACTCTCCGTTCTCGGCCATGGCAACGGCGGCACCGTCTACAAAGTCCGTCACAAACTCACCTCCACCATCTACGCTCTAAAAGTCAACCACAATGACTCCGATCCCACCACGCGCCGCCGTGCACTCACTGAAGTAAACATCCTCCGCCGCGCCACTGATTGTCCCAACGTTGTCAAATACAACGGCTCCTTCGAGAAACCCTCCGGTGACGTTTGCATTTTGATGGAATTCATGGACTCCGGCAGCCTTGAAACCGCCCTCAAAACCACCGGGACATTCTCCGAATCAAAACTCTCTACGGTGGCGCGTGACATTTTAAACGGACTCGCGTATCTTCACGCGCGTAACATAGCGCATCGTGACATAAAACCTTCGAACATCCTCGTAAACATCAAAAACGAAGTTAAGATTGCGGATTTTGGTGTCAGTAAATTTATGGGTCGCACACTTGAAGCATGTAACTCTTATGTTGGCACGTGTGCATATATGAGTCCTGAACGGTTTGACCCGGAAGTTTATGGAGGGAATTATAACGGTTTTTCAGCTGATATATGGAGTTTGGGTTTAACCCTTTTTGAACTTTATGTGGGTTATTTCCCATTTCTTCAATCGGGTCAACGGCCAGATTGGGCTTCGCTTATGTGCGCAATTTGCTTCTCCGACCCACCGAGCCTTCCTGAGACTGCTTCGCCCGAGTTTCGCAACTTTGTAGAGTGTTGTCTTAAGAAAGAATCCGGTGAGCGGTGGTCGGCGGCTCAGTTGTTGACCCACCCGTTTTTGTGTAAAGATATGGAAAGTTGTTAG 981 0.5025 MALVHRRNSPKLRLPEISDHRPRFPVPLPANIYKQSSSSSSAAVSGGGGDNVSAGDFEKLSVLGHGNGGTVYKVRHKLTSTIYALKVNHNDSDPTTRRRALTEVNILRRATDCPNVVKYNGSFEKPSGDVCILMEFMDSGSLETALKTTGTFSESKLSTVARDILNGLAYLHARNIAHRDIKPSNILVNIKNEVKIADFGVSKFMGRTLEACNSYVGTCAYMSPERFDPEVYGGNYNGFSADIWSLGLTLFELYVGYFPFLQSGQRPDWASLMCAICFSDPPSLPETASPEFRNFVECCLKKESGERWSAAQLLTHPFLCKDMESC* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3346 326 SMART serkin_6 57 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3346 326 Gene3D Transferase(Phosphotransferase) domain 1 140 325 - -
Mal6g3346 326 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Mal6g3346 326 SUPERFAMILY Protein kinase-like (PK-like) 54 321 IPR011009 -
Mal6g3346 326 CDD PKc_MAPKK_plant_like 56 319 - -
Mal6g3346 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Mal6g3346 326 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 6 323 - -
Mal6g3346 326 Gene3D Phosphorylase Kinase; domain 1 32 138 - -
Mal6g3346 326 MobiDBLite consensus disorder prediction 1 21 - -
Mal6g3346 326 ProSiteProfiles Protein kinase domain profile. 57 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3346 326 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 6 323 - -
Mal6g3346 326 Pfam Protein kinase domain 57 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3346 Mal-Chr6 97560778 97561758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3346 1 323 MAP Kinase Kinase Gene Family AT1G73500 57.669 3.18e-119 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mal6g3346 Pkinase 5.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3346 K20604 - gmx:100804100 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3346 6 97560778 97561758 Mal6g3346 6 97560778 97561758 ECH